Genomic Position | scaffold2373:- 3340-4146 |
---|---|
See gene structure | |
CDS Length | 807 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 1 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008438 (2e-15) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (1e-57) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (2e-56) |
GeneOntology terms    | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10020 |
Nucleotide sequence:
ATGATTAGCGAACAACTACGGAGAGAAAGACGAACGAAGCGATTTAATACGATCAAGAAT
TTCATAGAAAAACCAGGAGGAATAAAGAAGGCAATGAAAGAACTAAATAACAAAAAGAAT
TGGATCCCAAGCATGGAAAAGAAAGATGGTAAAGCATTCGATACACTAGACCGCGGATTT
ATCTGGGATGCACTAAAAACGCAGCGTGTACAAACAAAGTTGTATGCTTATGATGTTTTC
GTATACATCAAGAGTACAGCGCAAGTAAAACTAGAATATATAGCGGACGAATTTCATATT
GAGAGAGGCATACGTCAAGGAGACCCTATTTCGCCTAAATTATTTTCAGCCGTCTTAGAA
ATGGTATTTAGGAAACTAGATTGGCTGATTGAAGGACTAAATATAAACGGCGAAAACCTG
AGTCACTTACGTTTTGCAGAGGATATTATCATGTTCTCAGAGGACTCAAAAATACTCGAA
ACGATGCTGCAACAGCTCGCCGACGAAAGTGGCAAGGCGGGGTTAACAATGAATCTATCT
AAAACGAAAATTATGTCAAATTCCTCGCATACCGATGTCATAAAAATAAATAATGAACAA
ATAGAATATGTACATGAATACATTTACTGGGGACAGTTAATATCTACTGAAGACTGCATG
AAAAAGGAAATAGAAAGAAGAATCACGAATACATGGAAACGATATTGGTCACATAGTGAA
ATAATGAAGAACGAAGAAATGCCAACGAAAGAAAAAAGAAAAGTCTATAATATGTGTATT
CTACCATGCTTACTGTACGAGTGTTAA
Protein sequence:
MISEQLRRERRTKRFNTIKNFIEKPGGIKKAMKELNNKKNWIPSMEKKDGKAFDTLDRGF
IWDALKTQRVQTKLYAYDVFVYIKSTAQVKLEYIADEFHIERGIRQGDPISPKLFSAVLE
MVFRKLDWLIEGLNINGENLSHLRFAEDIIMFSEDSKILETMLQQLADESGKAGLTMNLS
KTKIMSNSSHTDVIKINNEQIEYVHEYIYWGQLISTEDCMKKEIERRITNTWKRYWSHSE
IMKNEEMPTKEKRKVYNMCILPCLLYEC