New model in OGS2.0 | DPOGS203643  |
---|---|
Genomic Position | scaffold2377:- 192-7006 |
See gene structure | |
CDS Length | 1440 |
Paired RNAseq reads   | 3446 |
Single RNAseq reads   | 11660 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009770 (3e-167) |
Best Drosophila hit   | ced-6, isoform A (2e-63) |
Best Human hit | PTB domain-containing engulfment adapter protein 1 (1e-39) |
Best NR hit (blastp)   | ced-6 protein [Bombyx mori] (0.0) |
Best NR hit (blastx)   | ced-6 protein [Bombyx mori] (1e-165) |
GeneOntology terms    | GO:0005575 cellular_component GO:0016319 mushroom body development GO:0005515 protein binding |
InterPro families    | IPR006020 Phosphotyrosine interaction domain IPR011993 Pleckstrin homology-type |
Orthology group | MCL13046 |
Nucleotide sequence:
ATGTCGACCCTGCTGTTTTGGCAGGGTAAGGGAAAGACCAACGGCGCCAACGGCCGAAAC
TGGATTCATGCCCCAGACGCCCTCGTCAAAGGACACGTCGCATATCTAGTTAAATTCCTC
GGCTGCACACAGGTGGACCAACCCAAGGGCATCGAGGTTGTCAAGGACGCAATTAAAAAG
TTGCAATTCACGCAACAATTAAAAAAATCCGAAACAAAGGATGCGGCGAAATGCAAGAAA
GTCGAGATAACCGTATCAGTAGACGGCGTCGCTATACAGGAGCCGAGAACAAACAATGTG
ATGTACCAGTTCCCACTGCATCGGATATCATACTGCGCTGATGACAAAGGAGCTAAGAAG
TACTTCTCATTTATAGCTAAAGGTGGCAGCACCGTCAACGGGGTCAATGGTCACGATACA
ACGGAGAAACATGAATGTTTTGTGTTTATATCAACTAAACTGGCCTCGGAGATAACACTC
ACTATAGGGCAGGCATTCGACTTGGCTTATAGGCGGTTTTTGAACGATAATGGGAAATAC
ATCGAAATGCAAAAACTGACCTTACAGAACAAGAAGCTCGAAATGCAAATGAACGCTTAC
AAGAATCGCTTACAGGAGTTATCAAAAATAACGTACAAGGATGACCTCTCGTCCTACCTC
AGCCGTCACAATCTCTCGGACATCACAGAGTTCAAGTGTCCAGAACTAGACGCTCAACTG
ACGGCCATCAATACAACATTAGCTAATGGGAAGACGGACACCGGTGATGCCACGTCCACT
AACTCCGCGGACACATTCAGTTCCAATGACAACAACCTACTGCTGTCAACACCACCACCA
ACACACAACGGTAGAAACAATACTGGTAAACTGCTTGGAGATCTGACAAATAAGAATCCA
GTTGTCGGTACCAAGTTGGAAGGACTGCTTCTACACTCGGACTCTGATAGTGATTTCGAC
CCGCGCGCTTTCGAGTCGGAGCCGAGCCCGCGATGCCCGGTCACAGCGCCGCCGCTCTTG
GCGCCACCACCGAAAGCTTCCAAACGACCACAACCACAACCACAACCACAACCACAGCCG
CAGCCACAGCCACAACCACAGAACGGCAGCGACCTATTCGGTTCATCACCGTTCACACCA
CAACAATCACCCAACCAGCAGTTCCAAACGAGCAAACCCAACTATGACATAAGCGACTTC
AACCTACAGAACTCCGTTTTCAACAACACGTTCACCAACGGCCTCACCAGCTACGACCCC
TTCGTCACACAGAACACATCAAACATATTTGGCAACCTCAACAACAGCTTCAACGGCTTC
GGCAACCTCAGTGACAAACAGACGGTCGAACTGAACAGCAACTTTAATGGTTTCCTCGAT
AAGACCATATCTGAAATGAAGGTAATATTAAATTATTTATATATGTATGGTGCTAAGTAA
Protein sequence:
MSTLLFWQGKGKTNGANGRNWIHAPDALVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKK
LQFTQQLKKSETKDAAKCKKVEITVSVDGVAIQEPRTNNVMYQFPLHRISYCADDKGAKK
YFSFIAKGGSTVNGVNGHDTTEKHECFVFISTKLASEITLTIGQAFDLAYRRFLNDNGKY
IEMQKLTLQNKKLEMQMNAYKNRLQELSKITYKDDLSSYLSRHNLSDITEFKCPELDAQL
TAINTTLANGKTDTGDATSTNSADTFSSNDNNLLLSTPPPTHNGRNNTGKLLGDLTNKNP
VVGTKLEGLLLHSDSDSDFDPRAFESEPSPRCPVTAPPLLAPPPKASKRPQPQPQPQPQP
QPQPQPQNGSDLFGSSPFTPQQSPNQQFQTSKPNYDISDFNLQNSVFNNTFTNGLTSYDP
FVTQNTSNIFGNLNNSFNGFGNLSDKQTVELNSNFNGFLDKTISEMKVILNYLYMYGAK