| New model in OGS2.0 | DPOGS204840 |
|---|---|
| Genomic Position | scaffold135:- 13127-17539 |
| See gene structure | |
| CDS Length | 1722 |
| Paired RNAseq reads | 415 |
| Single RNAseq reads | 1175 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011735 (6e-178) |
| Best Drosophila hit | CG10948, isoform D (6e-59) |
| Best Human hit | ecto-NOX disulfide-thiol exchanger 1 (3e-57) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (4e-95) |
| Best NR hit (blastx) | PREDICTED: similar to ecto-NOX disulfide-thiol exchanger 2 [Tribolium castaneum] (1e-88) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0000166 nucleotide binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL11710 |
Nucleotide sequence:
ATGATGATGAGTGGCATGTTCAATATGATGATGCCCAATCCAATGATGGCTGGAGGGATG
ATGCCTTCGAGCGGAATGGAGATGATGCAGAGCACCAGTATGGAGATTATTTCACAGCCA
CCAATAGACATAACCGCTATGGGAACACAACCCTTAGCCGCTCCGCCTTTGACACCATCA
ATGGACATGAGTATGATGGGTGGTGTTATGATGGATCCATCCATTATGGGTATGTTTCCA
AACATGAGTAACGAAATTGTGCCAGAGAAGAAGGAAATTGTCCTTAAGCATAGTAAGCTA
GTGGCACCAGCCCCAGGAACCCCACAACCTCCTCGAAGGACCAGGCCTCCGGGGTGTCGC
ACAATCTTTGTTGGTGGCTTACCAGAAAAAATAAGAGAGAATGCTGTAAGAGAAATATTT
GAGCGTTATGGAAGAATACAAATATTAAGGTTGTCCAAGAAAAACTTTTGTCACATACGT
TTTGATAGAGAGAGTTGTGTGGATGCAGCCATGGTTATATCAGGATATAGGATCAAAGTT
CTGAACAAGGAAGGTGATAAGGAAGAAGACGATAATAATGCCTCAAGTGGCTGGCTTCAC
GTTGATTACGCTTTGAGTAGGGACGATCAGAACGAGTATGAAAGACGCCAGCGTCTAGCG
CTGCGTGTTCAACAACAACAAATGCAACAGATGTCCGCACAACACGAGGCTATGAGTAAC
AGAAACGCCACGTACAGAAGATCTCCCTCACCCCTCAGGATACAACCCTTCTCAGCGACA
GCCATCGTACAGTTGACAGAGAAAATTAAAAGCGAAGAACATTTCGCCACCACACTTCCC
ACACTGATATCGTGGTTGGAACGCGGGGAGTGTTCCAAAAAGAGCGCCAATCAATTCTAC
TCTATGATCCAAGCGACCAATTCTCACATCAGACGACTTTTCAATGAAAAAATGCAGGCT
GAAGAGGAATTACAGGAATGCAAAGATAGAGTGAAAAATAATATACAGAATGTCATCGAG
CAACTCGAACAGGTGGGGAAAGTGTTTAACGCAGCGACCCACCAGCGTGTCTGGGACCAC
TTCACTAAACCACAAAGGAAGAATATAGAAACGTGGCAGAAAATGACGCAGGAGTTCAAT
ACATTGAAGGAGGAGTTCAGTGAGAGGTTCTTTAACGATGACTCGGAATACAATGGCACG
AGCAAGGGCAGTTACGATAGCAATAATGAAGACATAAACCAGTTGAAGCGTGAAAATGAG
AGTTTACAATTCCAATTGGAAGCGTACAAAAACGAGGTGGAAGTTATAAAGAACGACGCG
CAAAAGGAAATGGAGAAATTTAAGGCACAATTTATAGCGCGACAAGCATTGTTAGGGGCA
ATGGAAAACAAACCTCCCCTACCGTCGTCAGTATCAGAGCAGCCCCCGCCTCCCCCTCCG
CTGCCTGATGACGCGGATGACTCCCTGAAGACGGCCGCCGAGGTCGCGCCAGGGGAGGCC
AGGCTTATAGGAGTCATGTCAGCCTTCTTACAGGTACACCCCCGGGGAGCCAGCCTGGAC
TACGTGGTGTCCTATGTACGAGCGTTATTCCCAAACGTAACACAAGCAATAATACACCAT
GTACTGCAGAAGTACGAAGACGTGTTCCAGAAAACCACCAGCGGGGTCGGAGCCAATATT
GAGAACCGTTGGACCTTTGTAGCGTTTAATAATAAGACGTAG
Protein sequence:
MMMSGMFNMMMPNPMMAGGMMPSSGMEMMQSTSMEIISQPPIDITAMGTQPLAAPPLTPS
MDMSMMGGVMMDPSIMGMFPNMSNEIVPEKKEIVLKHSKLVAPAPGTPQPPRRTRPPGCR
TIFVGGLPEKIRENAVREIFERYGRIQILRLSKKNFCHIRFDRESCVDAAMVISGYRIKV
LNKEGDKEEDDNNASSGWLHVDYALSRDDQNEYERRQRLALRVQQQQMQQMSAQHEAMSN
RNATYRRSPSPLRIQPFSATAIVQLTEKIKSEEHFATTLPTLISWLERGECSKKSANQFY
SMIQATNSHIRRLFNEKMQAEEELQECKDRVKNNIQNVIEQLEQVGKVFNAATHQRVWDH
FTKPQRKNIETWQKMTQEFNTLKEEFSERFFNDDSEYNGTSKGSYDSNNEDINQLKRENE
SLQFQLEAYKNEVEVIKNDAQKEMEKFKAQFIARQALLGAMENKPPLPSSVSEQPPPPPP
LPDDADDSLKTAAEVAPGEARLIGVMSAFLQVHPRGASLDYVVSYVRALFPNVTQAIIHH
VLQKYEDVFQKTTSGVGANIENRWTFVAFNNKT