New model in OGS2.0 | DPOGS204855  |
---|---|
Genomic Position | scaffold135:+ 8207-12591 |
See gene structure | |
CDS Length | 1614 |
Paired RNAseq reads   | 1 |
Single RNAseq reads   | 16 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011752 (0.0) |
Best Drosophila hit   | CG6053 (1e-123) |
Best Human hit | dynein intermediate chain 2, axonemal isoform 1 (9e-114) |
Best NR hit (blastp)   | dynein intermediate chain 3, ciliary, putative [Pediculus humanus corporis] (1e-148) |
Best NR hit (blastx)   | dynein intermediate chain 3, ciliary, putative [Pediculus humanus corporis] (4e-139) |
GeneOntology terms    | GO:0005868 cytoplasmic dynein complex GO:0003774 motor activity GO:0005875 microtubule associated complex GO:0007018 microtubule-based movement GO:0042623 ATPase activity, coupled |
InterPro families    | IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain |
Orthology group | MCL11164 |
Nucleotide sequence:
ATGAGACGAACCCTCTTAGCAATCCATGGATTCACCGTGCGATTGCTGGATCCATCGCGT
TGCAGGGATAGGAGCTTCAACAGTGCCTGGGACTTGCGACCCAGGTGTAGAGCTGAATAC
ACAAGCTCGGGAGTTAACCATGTGGAGGGAGGCTGGCCGAAAGACATCAACATCAACGAT
CCCGAAGCAACTCAACGATATCGGAGAAAGATAGAGAAAGACGATGCTTACATACACGCA
GTCATGCATCTCGGCCACAGTATGGAACATAATATTCTTCAGAACAATGCAGTGGATATG
TATCAGATTTACTATTCTGAATTGCCTTCGATACCACCGGTGGAGCGAAGTAGCTGTCAT
ACCGTCAATGTTTATAGGGAACCAGGAGCTAACAGAAGGCCTATTCGTTCTTTATCGTGG
CAACAAGACGGAGCCCGACTTGCAACAGCTCACGCTGACATCTGTTTCACACGAAACTCT
AGAAATCTTCAGTTATCTTACATTTGGGATATAGAAAATGCAAATGCTCCTGAATTGACA
ATAACTCCGCCGCAGCCTCTCCTTGATTTGCAGTACAATCCTCGCGATCAACATATTCTT
GTCGGAGGTCTTATGAATGGTCAAGTGGGATGTTGGGACATGCGCCGAGGCGGTGAAGTC
ATTGCTCTGTGTCCACCTCACGTAGCACACAGAGAACTAACGAGAAATGTCCTCTTTATT
AATTCAAAAACTGGAGCAGAATTCTTCTCGGCGTCTCCTGATGGTGTCGTAAAGTGGTGG
GATACAAGAAACATGAGTGAGCCGACAGATTTTATGATCATAGATCCTGTTAAAACCAAC
AACGATACTCAGAGTGTTGAAAATGCACTCGGGATTTCTGCCCTCGAATATGAACCGACA
ATACCTACTCGTTTTATGATCGGTACCGAGACTGGGCTAGTCGTTGGAGGGAATAGAAAA
GGAAAAACTCCCTTGGAGAAACTACCTTCAAAGTACGAGGCACATCTTGGTCCTGTATAT
TCACTGCAAAGAAATCCAACGTTTCTGAAAAATTTTTTAACAGTTGGTGATTGGACAGCG
AGAGTTTGGAGTGAGGACTGCAGGGAATCTTCTATACTGTGGACACATTCGCATAGAACT
AAATTAACCGATGGGGCATGGAATCCAATAAGGTTCTCTCTAATGCTGGTGTCTCAGTGG
GACGGCTGTCTGTCCTGCTGGGACCTGCTCAGACGCCGCACGGCTCCCGTCGTCACAGCA
CAGCTCTGTGACGAGCCCTTGTTGAGAGTACGACCTCACGAGGGGGGTCTCTTGGTGGCG
TGCGGAAGTAGTAAAGGTACCGTTTACTTGGCGGAACTTTCAGAGAACCTCGGCACAGCT
GACAAAAATGACAAACAACTTTTGACCCATATCCTAGAACGTGAGAACAAACGCGAGCGT
ATCCTGGAGGCGCGCTTGCGAGAATTGCGGCTCAAGATGAGGCAGGAGCGAGACGTGGGG
CATCCGGACGGAGATTCCGCCCCCACTGACAAAGACCTGGAGGAAGCAGCCAATGAATAC
TCACTGATGGTGCAACAACTGCAGGAACAACAGAACAACCAGGACTTGGGATAG
Protein sequence:
MRRTLLAIHGFTVRLLDPSRCRDRSFNSAWDLRPRCRAEYTSSGVNHVEGGWPKDININD
PEATQRYRRKIEKDDAYIHAVMHLGHSMEHNILQNNAVDMYQIYYSELPSIPPVERSSCH
TVNVYREPGANRRPIRSLSWQQDGARLATAHADICFTRNSRNLQLSYIWDIENANAPELT
ITPPQPLLDLQYNPRDQHILVGGLMNGQVGCWDMRRGGEVIALCPPHVAHRELTRNVLFI
NSKTGAEFFSASPDGVVKWWDTRNMSEPTDFMIIDPVKTNNDTQSVENALGISALEYEPT
IPTRFMIGTETGLVVGGNRKGKTPLEKLPSKYEAHLGPVYSLQRNPTFLKNFLTVGDWTA
RVWSEDCRESSILWTHSHRTKLTDGAWNPIRFSLMLVSQWDGCLSCWDLLRRRTAPVVTA
QLCDEPLLRVRPHEGGLLVACGSSKGTVYLAELSENLGTADKNDKQLLTHILERENKRER
ILEARLRELRLKMRQERDVGHPDGDSAPTDKDLEEAANEYSLMVQQLQEQQNNQDLG