| New model in OGS2.0 | DPOGS204856 |
|---|---|
| Genomic Position | scaffold135:+ 19192-20175 |
| See gene structure | |
| CDS Length | 642 |
| Paired RNAseq reads | 51 |
| Single RNAseq reads | 149 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011753 (3e-67) |
| Best Drosophila hit | CG7339 (5e-69) |
| Best Human hit | DNA-directed RNA polymerase III subunit RPC8 isoform a (1e-61) |
| Best NR hit (blastp) | PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide H isoform 1 [Apis mellifera] (3e-76) |
| Best NR hit (blastx) | PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide H isoform 1 [Apis mellifera] (2e-75) |
| GeneOntology terms | GO:0003899 DNA-directed RNA polymerase activity GO:0006383 transcription from RNA polymerase III promoter GO:0005666 DNA-directed RNA polymerase III complex |
| InterPro families | IPR004519 DNA-directed RNA polymerase IPR013238 RNA polymerase III, subunit Rpc25 IPR005576 RNA polymerase Rpb7, N-terminal IPR016027 Nucleic acid-binding, OB-fold-like |
| Orthology group | MCL13986 |
Nucleotide sequence:
ATGTTTGTACTGTCGGAAATGAAAGATGTGCTAAGAGTTACACCTGAACACTTTCACCAA
AGTCTAACAGAGTCAATAACAACATTATTAAACAGAAAACTTGCTAATAAGGTCGTTCTA
AATGTGGGGCTCTGTATAGCATTATTTGATATAACCAATATAGGTCACTCATACATATTT
CCTGGTGACGGATCGTCACACACTGAAGTGATATTTAGGTATATTGTGTTTCGTCCACTT
GTTGAGGAAATACTTATAGGAAAAATAAGAAGTTGTAGCCGGGATGGGGTACATGTTACA
ATGGGTTTTTTTGATGACATTTTAATACCTGTGAATGCACTCCAACATCCATCTAGGTTT
GATGAAACAGATCAAGCCTGGGTTTGGGAATATCCCAAAGAAGATGGAGAAAAGCATGAT
CTATTCATGGATTCAGGTGAATCTATTAGATTTAGAGTAACAAGTGAGGAGTTTGAAGAA
AGTTTGCCAACTGGTCCACCAGGATCTGAACGTCCCACTCAAGCAGTGGCACCATATAGA
TTAATTGGTGGTATTAATGAACCGGGCCTAGGATTATTGACCTGGTGGGTGACACCAGAA
CAGGATGAAGGTGATGAAGAAGAACAAGAAGATGTTGAATAA
Protein sequence:
MFVLSEMKDVLRVTPEHFHQSLTESITTLLNRKLANKVVLNVGLCIALFDITNIGHSYIF
PGDGSSHTEVIFRYIVFRPLVEEILIGKIRSCSRDGVHVTMGFFDDILIPVNALQHPSRF
DETDQAWVWEYPKEDGEKHDLFMDSGESIRFRVTSEEFEESLPTGPPGSERPTQAVAPYR
LIGGINEPGLGLLTWWVTPEQDEGDEEEQEDVE