| New model in OGS2.0 | DPOGS204857 |
|---|---|
| Genomic Position | scaffold135:+ 33848-36772 |
| See gene structure | |
| CDS Length | 2322 |
| Paired RNAseq reads | 18278 |
| Single RNAseq reads | 45367 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011754 (0.0) |
| Best Drosophila hit | CG10077, isoform A (3e-167) |
| Best Human hit | probable ATP-dependent RNA helicase DDX17 isoform 3 (2e-161) |
| Best NR hit (blastp) | DEAD box ATP-dependent RNA helicase-like protein [Heliconius melpomene] (0.0) |
| Best NR hit (blastx) | DEAD box ATP-dependent RNA helicase-like protein [Heliconius melpomene] (0.0) |
| GeneOntology terms | GO:0003724 RNA helicase activity GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity GO:0005875 microtubule associated complex |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014014 RNA helicase, DEAD-box type, Q motif |
| Orthology group | MCL10086 |
Nucleotide sequence:
ATGGGTAACAAGAACTTCAGACCCAGAAATGATTTTAATGGAATGAGAAATGACTTCAAT
GGCATCAAAAATGATAACCAAAATGATTTTGGTGGACCAAAAGATTACAGGCCAAGAAAT
AATTACAACAACCAATTGCAAAAGAAAGATTATGAAGGGGATAAGGCTGGAGGTAATATG
CAGTTCTATAATGGAAAGAATGATTTTGGAGGACCTAAACAACAGAACTTCCAAAAGAAT
TATGGACCCAAAAACTATAACAACCCTAATGGAAACAATAATGGCCAACAAACATTTGTT
CCTAAAAAGATTTACAGCAACAGTTCTGTGTCTCCCACCAATGAGTTTTCTGACAGGAAG
ATGCAGAGTCGTAAAGCCAAACACCCAGGTGAAGCATTGACTAAACCTGAATGGGATATG
TCGAATCTGGATACCATTCAGAAAAACTTTTACAAACCTCATTCTAATGTTGAGGCGAGA
ACTGATGATGAAGTCCAAGTTTTCCGTGCAGCCAAAGAGATCACAGTTAGTGGGAATAAT
GTTCCTCGTCCTAACCATATATTTGATGAAGGTAATTTCCCTGATCATATTATGACAACT
ATTAGAGAACAAGGTTGGGAAGAACCTACTGGTATTCAAGCACAAGGTTGGCCTATTGCT
TTATCTGGTCGTGATATGGTCGGAATTGCATCCACTGGATCTGGCAAAACTCTTGCTTAT
ATACTCCCAGCAGCTGTGCATATTGTTCATCAACCCAGGATCCAGCGAGGTGATGGACCT
ATTGCTCTGATTTTGGCTCCAACAAGAGAATTGGCCCAACAAATTCAGTCAGTTGCTCAG
GCGTACAGTGCCCGCGGCTTTATAAGAAACACATGTTTGTTTGGTGGCTCTCCTAAAGGG
CCTCAAGCCAGAGACTTAGAAAAAGGAGTGGAGATTGTTATAGCCACTCCTGGGCGACTG
ATCGATTTCTTGGAGCGTGGAACTACCAATCTACGGCGATGCACATACCTGGTGTTAGAC
GAAGCAGATAGAATGTTAGACATGGGTTTCGAACCCCAGATCCGTAAAATTATTGAGCAA
ATCCGTCCAGACCGTCAAGTATTGATGTGGTCGGCTACCTGGCCAAAAGAGATTCAGGCT
CTGGCCGAGGACTTCCTAACTGATTACATCAAAGTCAATATTGGATCATTGAATCTTTCC
GCCAATAACAATATCAAACAGATCATAGAAGTGTGTGAAGAGCACGAAAAGGAAAGCAAA
CTCATAAACCTTTTAAAAGAGATATCTTCAGAAAAAGATAACAAAGTCATCGTATTTGTT
GAAACAAAGAAAAAGGTGGATGATATTGCGCACGCAGTTCGCCGCAATGGCCACAAGGCT
TTGGCTATTCACGGCGATAAGTCACAACCAGAGCGAGACGCAGTTTTAACGGAGTTCCGT
AACGGATCTACCACAATACTCATCGCGACCGATGTTGCCGCTCGTGGATTGGACGTTGAA
GATGTCAAGTTTGTTGTTAACTATGATTATCCTAACACTTCAGAGGATTACATTCATAGG
ATTGGTCGTACTGGCAGATGTCAACAATCAGGAACAGCTTACACATACTTCACCAGCGGC
GACGCCCGTCAAGCTCGAGCTCTAGTTGCCGTTTTACGTGAAACGGGTCAAAATCCTCCC
TCAAAATTGAGTGATATGGCAAGAAACAACAACAATAGCTCAAGTCGCAACCGCTGGCAA
CAACGCAAAGAAAATAACAGCGGAGCCAGTTCACCACGTCAGAAGAATAACCAGTGGAAC
AACAAGATGGCGATGACAAGTCCCGAAGATAACCAAAACAGTTACCAGAACCGCAACCCG
AACCCACAAGCTCCGAGGTTTTCTAATCAGAACCAGAACAACCAAGGGTACAGACAGAAC
ACATACCAAAAGACAGTGCCCTTCCCAAGTCCAAACGTATTCGATTCAATGGGCAGTTAT
CAGGGCGGCTACAACAACGGATACCAGAACGCCTACAACAATCAAAATGGATATGGACAA
CATCCTCGTAACGGAGGACAACAATACCGTAATACAAATTCAGTTGGAAACAAATCTGCC
GGATCTGGATCGTCCTACGGATCGCCGCCGCCTCATTTCGCCACCCCCCCACATTATCCA
CAAATGCACCCACATCACCAGGAAATGTTGGGTGGTAAATTCTACGGCGGTGGCGTCGGT
GGCGGCGGCCCCTGCGGCTACCAGGCTACGGTGGGCGCGGGCGTGCCCTACCCCCACCTC
CCCCCCGGCCCGCTGCTCTACGCCGCCCCAGTACAGCAGTAA
Protein sequence:
MGNKNFRPRNDFNGMRNDFNGIKNDNQNDFGGPKDYRPRNNYNNQLQKKDYEGDKAGGNM
QFYNGKNDFGGPKQQNFQKNYGPKNYNNPNGNNNGQQTFVPKKIYSNSSVSPTNEFSDRK
MQSRKAKHPGEALTKPEWDMSNLDTIQKNFYKPHSNVEARTDDEVQVFRAAKEITVSGNN
VPRPNHIFDEGNFPDHIMTTIREQGWEEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAY
ILPAAVHIVHQPRIQRGDGPIALILAPTRELAQQIQSVAQAYSARGFIRNTCLFGGSPKG
PQARDLEKGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ
IRPDRQVLMWSATWPKEIQALAEDFLTDYIKVNIGSLNLSANNNIKQIIEVCEEHEKESK
LINLLKEISSEKDNKVIVFVETKKKVDDIAHAVRRNGHKALAIHGDKSQPERDAVLTEFR
NGSTTILIATDVAARGLDVEDVKFVVNYDYPNTSEDYIHRIGRTGRCQQSGTAYTYFTSG
DARQARALVAVLRETGQNPPSKLSDMARNNNNSSSRNRWQQRKENNSGASSPRQKNNQWN
NKMAMTSPEDNQNSYQNRNPNPQAPRFSNQNQNNQGYRQNTYQKTVPFPSPNVFDSMGSY
QGGYNNGYQNAYNNQNGYGQHPRNGGQQYRNTNSVGNKSAGSGSSYGSPPPHFATPPHYP
QMHPHHQEMLGGKFYGGGVGGGGPCGYQATVGAGVPYPHLPPGPLLYAAPVQQ