Genomic Position | scaffold7434:+ 2226-9939 |
---|---|
See gene structure | |
CDS Length | 825 |
Paired RNAseq reads   | 939 |
Single RNAseq reads   | 3046 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003307 (3e-73) |
Best Drosophila hit   | CG10277, isoform C (3e-32) |
Best Human hit | E3 ubiquitin-protein ligase RNF13 (4e-35) |
Best NR hit (blastp)   | PREDICTED: similar to CG10277-PA, isoform A [Apis mellifera] (2e-80) |
Best NR hit (blastx)   | PREDICTED: similar to CG10277-PA, isoform A [Apis mellifera] (9e-63) |
GeneOntology terms    | GO:0005515 protein binding GO:0008270 zinc ion binding GO:0046872 metal ion binding |
InterPro families    | IPR003137 Protease-associated domain, PA IPR013083 Zinc finger, RING/FYVE/PHD-type |
Orthology group | MCL13618 |
Nucleotide sequence:
ATGCAGCACGCATCACATTTCTGCCTGACGGCTGTGCTCAGTGTGTTGACCTCCGTACAC
GGCAATGTTATAGTCTATACACAGGAACTACCTCACACGATAGCGGAGGAGTTTCTAGAT
GTGCCAGCCAGCTTCGGTCCCGAGCTGCCGGCGGATGGTCTCCGGGGGTACCTGGTGGCG
GGCGAGCCTCGGGACGGGTGCTCCGTCCTCGAGAAGCCGCCCCTCGACGAGAACTTCACC
GGCAAATGGGTCGTATTGATAGCCAGGTACAACTGCAGTTTCGAAGTGAAAATTCGCAAC
GCTCAAGAGGCGGGCTTCGACTGCGCCATAGTGCACAATGTCAACTCGAGCGAACTCGAG
ACGATGTCAGCAAAGGATCCCGACACTATAACAATACCGTCCGTGTTCGTGAGCGACCTC
GCCGGCATCATACTGGGCGAGGAGTACATCTACACCAACCATTACTACATCATGGTGAAC
GGCGACATACCCTTCAACATCAACACGCACCTCCTGCTGCCGTTCGCCGTGGTGGTGGTG
CTGTGTCTCGTCGTCATACTCATCTTCATGATAGTGAAATGTATAAAGGACCGGCGGAGG
GCGCGGAGACACCGGCTGCCGAACCGCTCCTTGAAGAAGATCCCCACCTGCAAGTTCAGC
AAGGGGGATCCCTACGACACCTGCGCCATCTGCCTCGACGACTACCAGGAGGGCGAGAGG
CTCAGGGTGCTGCCCTGTGCTCACGGTGAGAACACGAGCTTACTAACAACAACCAGGTTT
TCCAGCACTGACCTGGAAACAAAATATTCTTTTCTTATTCTATGA
Protein sequence:
MQHASHFCLTAVLSVLTSVHGNVIVYTQELPHTIAEEFLDVPASFGPELPADGLRGYLVA
GEPRDGCSVLEKPPLDENFTGKWVVLIARYNCSFEVKIRNAQEAGFDCAIVHNVNSSELE
TMSAKDPDTITIPSVFVSDLAGIILGEEYIYTNHYYIMVNGDIPFNINTHLLLPFAVVVV
LCLVVILIFMIVKCIKDRRRARRHRLPNRSLKKIPTCKFSKGDPYDTCAICLDDYQEGER
LRVLPCAHGENTSLLTTTRFSSTDLETKYSFLIL