| New model in OGS2.0 | DPOGS207864 |
|---|---|
| Genomic Position | scaffold12033:- 1841-4479 |
| See gene structure | |
| CDS Length | 768 |
| Paired RNAseq reads | 1583 |
| Single RNAseq reads | 5086 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004657 (3e-27) |
| Best Drosophila hit | proteasome alpha7 subunit (6e-83) |
| Best Human hit | proteasome subunit alpha type-3 isoform 1 (5e-97) |
| Best NR hit (blastp) | proteasome alpha 3 subunit [Bombyx mori] (6e-140) |
| Best NR hit (blastx) | proteasome alpha 3 subunit [Bombyx mori] (8e-134) |
| GeneOntology terms | GO:0051603 proteolysis involved in cellular protein catabolic process GO:0005839 proteasome core complex GO:0004175 endopeptidase activity GO:0006511 ubiquitin-dependent protein catabolic process GO:0019773 proteasome core complex, alpha-subunit complex GO:0004298 threonine-type endopeptidase activity GO:0000502 proteasome complex GO:0005634 nucleus GO:0008233 peptidase activity GO:0016787 hydrolase activity GO:0005737 cytoplasm |
| InterPro families | IPR000426 Proteasome, alpha-subunit, conserved site IPR001353 Proteasome, subunit alpha/beta IPR023332 Proteasome A-type subunit |
| Orthology group | MCL15695 |
Nucleotide sequence:
ATGAGCTCTATCGGAACCGGTTACGATCTATCGGCATCACAATTTTCACCTGACGGCAGA
GTATTTCAAGTGGAATACGCTGCTAAGGCCGTAGAAAACTCCGGCACAGTCATAGGCTTA
CGAGGAAAGGATGGTGTAGTTTTTGCAGTCGAAAAACTTGTTTCTTCTAAACTTTATGAA
CCAGGTGCAAATAAGAGGATTTTCCATATTGATGAACATGTTGGCATGGCTGTTGCGGGT
CTTATATCTGATGCACGACAAATTGTAGAGACAGCAAGATCTGAAGCCTCCAACTATAGA
TCTCAGTACGGCGTGCCAGTACCCTTGAAGTATCTTAATGAACGTGTATCAATGTATATG
CATGCATACACTCTCTACAGTGCTGTACGTCCGTATGGATGCTCGGTTATAATGGGTACT
TGGACAGATTACGAAGGACCCCAAATGTATATGCTAGAACCTAGTGGTGTTTCATTTTCT
TACTTTGGATGTGCTGTTGGTAAAGCAAAGCAGGCTGCGAAGACGGAAATTGAAAAACTT
AAACTTGCCGATTTAACTGTGAAGGAGTTGGTGAAGGAAGCGGCTAGAATAATATACATA
GTCCACGACGAGTTAAAAGACAAACAGTTCGAGTTAGAACTATCCTGGGTGTGTAAAGAC
AGTAATGGCCGCCATCAGCTCGTACCCAAAGATATGGCTGTAGAAGCTGAGAACCTCGCC
AAGCAAGCACTCGCTGACATTGAAGACTCCGATGAAGGGGATATGTAG
Protein sequence:
MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLVSSKLYE
PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGVPVPLKYLNERVSMYM
HAYTLYSAVRPYGCSVIMGTWTDYEGPQMYMLEPSGVSFSYFGCAVGKAKQAAKTEIEKL
KLADLTVKELVKEAARIIYIVHDELKDKQFELELSWVCKDSNGRHQLVPKDMAVEAENLA
KQALADIEDSDEGDM