| New model in OGS2.0 | DPOGS207882 |
|---|---|
| Genomic Position | scaffold342:+ 43223-62447 |
| See gene structure | |
| CDS Length | 4590 |
| Paired RNAseq reads | 1266 |
| Single RNAseq reads | 3083 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008358 (0.0) |
| Best Drosophila hit | sprint, isoform G (4e-74) |
| Best Human hit | ras and Rab interactor 2 (1e-20) |
| Best NR hit (blastp) | GG18915 [Drosophila erecta] (3e-131) |
| Best NR hit (blastx) | GA26435 [Drosophila pseudoobscura pseudoobscura] (1e-93) |
| GeneOntology terms | GO:0017016 Ras GTPase binding GO:0005575 cellular_component GO:0006897 endocytosis GO:0007165 signal transduction GO:0007298 border follicle cell migration |
| InterPro families | IPR000980 SH2 motif IPR013995 Vacuolar sorting protein 9, subgroup IPR000159 Ras-association IPR003123 Vacuolar sorting protein 9 |
| Orthology group | MCL12827 |
Nucleotide sequence:
ATGGCTCCCGTTGTACTCTCCATGTTTGAACTGAATGCTACATTTCTAGAACCTCATCTT
CAAGGAGTACGGCACAGGGAGAGTCGGAGCTCAGAGTCTGATCATGATGGGCGATCGACT
GAGGATGACGAGAGATCTCTCATCAGAAGCCCGCCTCGAACAAGACTGCCGCAGCCGCCG
CCCCCGCCGCCAGACGATGAACCCCCGCCGATGAAGCCTCGTGAATTCTTTGAAAGACTG
CAAAGCCAAGCTATGAAAGAAGCTCAGGACAGGAAGCAAAAACGAGAAATTAAAGAAACG
AATCACCTCTTTCAGCCGCTAGACGCTGAGGGCAGTCTAGGGGATAGCCTCAGTCAGAGT
CGCGAAAGCCTGACGTCTGATGGAGAGGGCGCAAAAGGTGACTGTTCTTCAGTTGGATCC
TCTGCATCTGAGTCTGAGGAACAGCCTCCATGCGACATTGGCCTTCTGGAGCGCCTAATA
AGAACGCATCCAGTATGGTTCCTACCTGGAATTCAAAGAGCTGGTGCCTTTCATTTGCTT
CAAGGGAAAGAAGAAGGCAACTTCGTGGTGCGGCAATCGAGTCAGCAAGACACAATGGCG
ATCAGCGTACGCCTCCCAGCAGATAAAGGCCCCTACATTGAGCACTATCTGATTCAGGCA
TCAGGTGGCCGTATCGGCTTAGAGACTTCCCACAATCGCTTCGACAATATACCTGAACTG
ATTGCTCATTATTCTCAATGCTGTGACGAGCTACCTGTTCAGCTTCAATTGCCGAAGCCG
CTTCAAGAAGCTAAAAGCCGTCATCAATTGAGTTCCCTCGCTCTCCTCGGTCAGGAGTTT
TGGGGATACCCAATGGCTAATTCAAAAACCAATCTTAATAATCTTCTGTCACCTTGTCAA
TTGACCAATGGAATTGTTCCCATGGCTGTTACGCCCTCTGATACTGGTTCTAGTCTTAGT
AGTATTCATGCCGGTACAGCGGCTAACTCCCGCGAACAAATTTTAAGTCCAGATAAGGAT
CAGAACGTTGTTCTTAAAATGTCACCAGTTGAAGCTTCTGGTTCCCCACCGAAACAAACC
CAGAATCTTTCTACGTTCAAAGGTCGTAATGTTCCATCGCCACCAGCTAAGCCAACCGGA
TCATTCGTAAGAGCTCCGAGGCCAACGCCACCGAATACCCTTAACCTTATATCCAGTACG
GCACACATAACACAGCCTCATACATTTCCTACAACCAATAATCAGCATTCCCCTACACAC
TCCAGTAGCGTGAAAATGACTCCACCTCCTCCCCCACCTCGTTGGGCTAAGCCCCCTTTC
ACAAAAATGACCCTATCTCCAAAATCAGAAGCTCTCGCTTTCAGACCCATTAATAAAGCT
ACAAATGGAAATATAACAGTTACAACAACGGTAACATTCAGTGTCAACAATACACAAATA
CACAATCATCAAATAAACGAGAGTATACAAAGCGACCGGCTACAGCTAACGCTTGGCTCT
AACACTATGAACAATAATGATTGCGAATCCGGCTTCAGCTTAATGGACGCAACGAAACAT
ATAACAGAACCTAACGGAGAACTACAGAATATGATGCACCGTATGACACCAGAAGGAGAA
TGTATAAGTACAATGACAGCTAGTTTACACGGCAGCTTTAAAAGGCAGATCGCTGAACAA
AGTAACGCTGATGCGGGATCACCATTAGACCAATCTCAAACAAATTCATCCGAATTATTA
GATCCTGTCGTAAATACGTTGACGAAATCCTGTAATGAAAGCAACGTTTCTGCTTCCAAT
CAATTAGTTTCACCTAATGGTACCAATTCCGTTACAAGTGGCATATTCTCACCCACAAGT
CAAATAAATTCTCCAGTGTCTAATGATACGATTTCTTCAAAAAGTGGTGTATTTTCACCA
ATCAGTCAGAATAATAAAAGTGAGGTATTCTCTCCTACATTAAGAAGTTCACCAGTTTTT
AACAAAACTGTATTTTCTCCGACTTCTAATCATTCTATTGTGTCTCCTTTAACTGGTAGA
GATAAAGTGTTGTCACCTAATACTAATACAACAAGTTCTACACCTTCTGGTAGATCAAGG
AGGAGTAAGCACTCCATGCGCAAGGAGTCCAAACATTATCAGGAATCAGATATTATTGAA
TCCCCTGGAGTTTATTACAGGAGTTCTCTTGTAGATAAGGTTAGTGATTATGAGGATATT
TGGGGACCTGAGAGTAATAATTGTTCAACTTTTAAACCACAAAAAGCCGAAAATGACTAT
AATGTTAATAATGGAATAATGAAAAGTAAAAGACCAGATCTGCTACCAGATACACTCCCT
AAACCCAATACAATTAAGAACGCGCAGTCTGTCCTGGAAAAAGAAAATCTGATCATATTA
AACTCGACAGAATGTTTAAACGAAAAGAAAAACTACTCCACCAATTCTCTGAAAAAGAAG
AGCTTTAATGGATCTAACGAAATCATAGCGACCACAAACAGTAAGGGTGAAGTGGTAGCG
AAAAGGCCAGATAGACTGCATATCGCGATGAATATGAACAAGAAACTAACAGAGGAGATT
GAAGCAGCTTTAAAAATAAGAGAGAATCATAACATAGAGAGCATGGAAACCGTCAAGTTA
GAAGATGATACTCAGGATGATGATTCGGATAAAGAACACGCTGGCAGTCCATTTTATGCT
GATCCAGTGGATGCCATAAAAGAAGCTGCTCTTCTTCCCGTACAACGTCGAAAGCTCCTC
AGATCTGGAATAAGTCAATCCCAAAGGTATTCTGAACCACCAACTCAGAACCATCCCTAT
TATCCACTCCGTGATATGCACAGTATTGAAGAGCTATCGCCATCATCACCTAATACATCA
ACGTCAGTAGATAATCTTGTATCTCTAAGAGCTAAACCGAAGATGAAACCAGTGGAGCCA
CCACGTGTCGCAGCGAAACCACCAACTGGCAAAAATGAAACTACCTGGGCTGTGGATTCC
AGTTGGCAGTTTATAACAAAGAACGACGAATGTTCGAACAGTGACGGCGCATTTCCTTCT
CTAGCGGAACAGGAGAGGCTTAATGTGGACGAACACTTGCTCACAGTACATCAAATTGTC
GCTCAAAGACTACCAGAGCTACGTCTGAACGCCGAACCTTTCGCATTACCAGATGAAGTC
AGATCGCCTCCTCGCGCATCTTGCTATGATAACGTACATGACCTTCGACCTATGTCAGAA
CAAGCGAGTGATGACGGCACTGTGTTCTCTGAGCCCTGGGACAGCTCTCAGTGGGATGGA
TTATTGCCACCACCTAACGGACAGGCTTATGACAATGAGGAAGTCTGTGAGTGGGAATCT
CCCACCCCAAGACGAGGGGCAGTTCCGGCACGAGCCAAAAGCTTCAAAGATCGATTGGAT
CCCTTACTCGCAGCGGGACGTGTCCGAGCCTTGCGCGGCGGTCGTACTTCTCGGGGAGCC
GGTGCAGCATTAAGAGCTTACGCTCTGCACTTGGCACAAGATAAGAGTACTACCTTTGCA
CAAAACGTGGATAACTTCATTGCTTGCACCCTAGACTCTAAGGAAACATGCCCACAGATA
ATGATGCGTAACATGAGGCAGTTTATGTCGGGTATGAAAAACTATTTGGTGAAACACGGC
GAGAGAGAATTCGAAAAAGAAGTAGAGAAAGAGCGACTCAAGTTGAAACCAACTGAGTTC
TTAAACCTGGATGCAATACTGGAGGGAGTGATGCACCGTCTCGTGGTGCGGCCGCTTCGC
TCGAAATTGTATTCTCTGTTGGCGTCGTGGCATTCCGCAGATGTGCGTCAATTACATTCA
GCTATCGAAAAAGCACAACATGCTACACCCTTGCAACTTGGTATTAAGGAATCGACGAAA
GTGCCATCAACAGCAGTATTGGCGGTGATATCGAAACATTTCCTCAAAATGCAGGAAGCC
GATTCTCCCTTGGACAAACTGGAAAATCTGCTAGCAGCGATATCTGTCATGTTTAACGCG
ATTCGTGGAGAGCGTACCCTGGGTGCGGATGATCTATTGCCGGTGTTAGCTTGGACAGTG
GCGCGATGTCGTTTGGTCTGTGCTGAGCTAGAAGCGGAACTGATGGCTGGGTTGTTACCC
GCAGCGTTACTGGCCGGTGAAGGCGGTTATTACTTAACTGCTCTATTCTCAGCCGTCGCT
GTTCTTAAGAGATTGGCGCCTGATCCTGGACCTGATAGTACGACACCGTGGCGTCGTGGG
TCTGGTGAGTCTCGGGAGGTGGGTGTAGCGGTGGTCCGTGTGGCTTTACCAGACGAATGT
CGCGGGTCCATCCGTCGCGTGGCGCTCCCCTGCCGGCCCGGAGCCCGAGCTAGAGACCTC
TGTCGAGCGCTCGCACACGCGGCACACATTACGAACCCGCAAGACTATGCGCTTTTCGCC
CTACATGATGGACAAGAAACAATGTTAAATGAGAATGATTGTCCACAAGAAGTAATGTCA
GAGAAGAGTGGTCAGAACTTCATATTGGCTTATAAGCGAATAGATGCTAAAATCGCGTGG
CCGCAACAAGCACTCTTGTCTTACCCGTAG
Protein sequence:
MAPVVLSMFELNATFLEPHLQGVRHRESRSSESDHDGRSTEDDERSLIRSPPRTRLPQPP
PPPPDDEPPPMKPREFFERLQSQAMKEAQDRKQKREIKETNHLFQPLDAEGSLGDSLSQS
RESLTSDGEGAKGDCSSVGSSASESEEQPPCDIGLLERLIRTHPVWFLPGIQRAGAFHLL
QGKEEGNFVVRQSSQQDTMAISVRLPADKGPYIEHYLIQASGGRIGLETSHNRFDNIPEL
IAHYSQCCDELPVQLQLPKPLQEAKSRHQLSSLALLGQEFWGYPMANSKTNLNNLLSPCQ
LTNGIVPMAVTPSDTGSSLSSIHAGTAANSREQILSPDKDQNVVLKMSPVEASGSPPKQT
QNLSTFKGRNVPSPPAKPTGSFVRAPRPTPPNTLNLISSTAHITQPHTFPTTNNQHSPTH
SSSVKMTPPPPPPRWAKPPFTKMTLSPKSEALAFRPINKATNGNITVTTTVTFSVNNTQI
HNHQINESIQSDRLQLTLGSNTMNNNDCESGFSLMDATKHITEPNGELQNMMHRMTPEGE
CISTMTASLHGSFKRQIAEQSNADAGSPLDQSQTNSSELLDPVVNTLTKSCNESNVSASN
QLVSPNGTNSVTSGIFSPTSQINSPVSNDTISSKSGVFSPISQNNKSEVFSPTLRSSPVF
NKTVFSPTSNHSIVSPLTGRDKVLSPNTNTTSSTPSGRSRRSKHSMRKESKHYQESDIIE
SPGVYYRSSLVDKVSDYEDIWGPESNNCSTFKPQKAENDYNVNNGIMKSKRPDLLPDTLP
KPNTIKNAQSVLEKENLIILNSTECLNEKKNYSTNSLKKKSFNGSNEIIATTNSKGEVVA
KRPDRLHIAMNMNKKLTEEIEAALKIRENHNIESMETVKLEDDTQDDDSDKEHAGSPFYA
DPVDAIKEAALLPVQRRKLLRSGISQSQRYSEPPTQNHPYYPLRDMHSIEELSPSSPNTS
TSVDNLVSLRAKPKMKPVEPPRVAAKPPTGKNETTWAVDSSWQFITKNDECSNSDGAFPS
LAEQERLNVDEHLLTVHQIVAQRLPELRLNAEPFALPDEVRSPPRASCYDNVHDLRPMSE
QASDDGTVFSEPWDSSQWDGLLPPPNGQAYDNEEVCEWESPTPRRGAVPARAKSFKDRLD
PLLAAGRVRALRGGRTSRGAGAALRAYALHLAQDKSTTFAQNVDNFIACTLDSKETCPQI
MMRNMRQFMSGMKNYLVKHGEREFEKEVEKERLKLKPTEFLNLDAILEGVMHRLVVRPLR
SKLYSLLASWHSADVRQLHSAIEKAQHATPLQLGIKESTKVPSTAVLAVISKHFLKMQEA
DSPLDKLENLLAAISVMFNAIRGERTLGADDLLPVLAWTVARCRLVCAELEAELMAGLLP
AALLAGEGGYYLTALFSAVAVLKRLAPDPGPDSTTPWRRGSGESREVGVAVVRVALPDEC
RGSIRRVALPCRPGARARDLCRALAHAAHITNPQDYALFALHDGQETMLNENDCPQEVMS
EKSGQNFILAYKRIDAKIAWPQQALLSYP