New model in OGS2.0 | DPOGS206312  |
---|---|
Genomic Position | scaffold949:- 24623-27734 |
See gene structure | |
CDS Length | 765 |
Paired RNAseq reads   | 255 |
Single RNAseq reads   | 737 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014130 (5e-122) |
Best Drosophila hit   | core 1 galactosyltransferase A, isoform A (4e-97) |
Best Human hit | glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 (2e-70) |
Best NR hit (blastp)   | GE10709 [Drosophila yakuba] (2e-100) |
Best NR hit (blastx)   | GI12045 [Drosophila mojavensis] (2e-101) |
GeneOntology terms    | GO:0048531 beta-1,3-galactosyltransferase activity GO:0009247 glycolipid biosynthetic process GO:0006486 protein amino acid glycosylation GO:0016263 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity GO:0016021 integral to membrane GO:0016267 O-glycan processing, core 1 GO:0021551 central nervous system morphogenesis |
InterPro families   | IPR003378 Fringe-like |
Orthology group | MCL14717 |
Nucleotide sequence:
ATGACACAGCCGAGTAACCATAAGAAAAAGGCTATCCATGTTAAAGCTACGTGGGGGAAG
AGATGCAATAAACTGTTGTTTATGAGCACCGTCGAAGATGAGAGTTTGCCATCAGTGAAG
CTACCAGTGTCAGAAGGAAGGGATTATCTTTGGGCGAAAACTAAAGCTGCCTTCAGATAC
GTTTACGAACATCACAGGAGAGACGCAGACTGGTTCCTTAAAGCTGATGACGACACGTAT
GTGGTAGTAGAGAACCTGAGGTACATGCTGTCAGAGCACGACAGCAAGGAACCGATGTAT
TTCGGATGTAGATTCAAACCATTCACCTCGCAGGGCTACATGAGCGGCGGGGCTGGGTAC
GTTTTAAGCCGAGCGGCTCTGGACAAGTTCGTGAGGAACGGTCTGCCGTCACCACACCTG
TGTAAGGCGGGCGACCACGGGGCCGAGGACGCCGAGATGGGTATATGCCTTCAGCACCTG
GGCGTTAAGGCGATGGATTCGCGGGATTCTCTCCAGCGGGGACGATTCTTTCCCTTCGTC
CCTAAGGATCATTTGTTCCCCAACAAGGATAAAGGCTTTTGGTACTGGCAGTACATATAC
TATCCCACTGATGAGGGTCTAGACTGTTGTTCCGACCACGCGGTTTCCTTCCACTACGTG
AATCCTGAACAGATGTACGTATTGGACTATCTGATATACCACCTGAGACCATACGGCATC
AACTACAGGGGCTCCATACCCAGGAACGACACTGACGTTAGATAG
Protein sequence:
MTQPSNHKKKAIHVKATWGKRCNKLLFMSTVEDESLPSVKLPVSEGRDYLWAKTKAAFRY
VYEHHRRDADWFLKADDDTYVVVENLRYMLSEHDSKEPMYFGCRFKPFTSQGYMSGGAGY
VLSRAALDKFVRNGLPSPHLCKAGDHGAEDAEMGICLQHLGVKAMDSRDSLQRGRFFPFV
PKDHLFPNKDKGFWYWQYIYYPTDEGLDCCSDHAVSFHYVNPEQMYVLDYLIYHLRPYGI
NYRGSIPRNDTDVR