New model in OGS2.0 | DPOGS212906  |
---|---|
Genomic Position | scaffold1590:+ 11028-21929 |
See gene structure | |
CDS Length | 912 |
Paired RNAseq reads   | 55 |
Single RNAseq reads   | 207 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013981 (4e-103) |
Best Drosophila hit   | Wnt oncogene analog 2 (4e-66) |
Best Human hit | protein Wnt-7b precursor (3e-77) |
Best NR hit (blastp)   | PREDICTED: similar to Wnt7-1 [Nasonia vitripennis] (5e-92) |
Best NR hit (blastx)   | PREDICTED: similar to Wnt7-1 [Nasonia vitripennis] (1e-93) |
GeneOntology terms    | GO:0001701 in utero embryonic development GO:0001944 vasculature development GO:0003338 metanephros morphogenesis GO:0003674 molecular_function GO:0004871 signal transducer activity GO:0005109 frizzled binding GO:0005515 protein binding GO:0005576 extracellular region GO:0005578 proteinaceous extracellular matrix GO:0005615 extracellular space GO:0005737 cytoplasm GO:0005886 plasma membrane GO:0006917 induction of apoptosis GO:0007223 Wnt receptor signaling pathway, calcium modulating pathway GO:0007257 activation of JUN kinase activity GO:0007275 multicellular organismal development GO:0008284 positive regulation of cell proliferation GO:0009986 cell surface GO:0010628 positive regulation of gene expression GO:0016055 Wnt receptor signaling pathway GO:0016332 establishment or maintenance of polarity of embryonic epithelium GO:0021846 cell proliferation in forebrain GO:0021871 forebrain regionalization GO:0022009 central nervous system vasculogenesis GO:0030182 neuron differentiation GO:0030324 lung development GO:0031175 neuron projection development GO:0032364 oxygen homeostasis GO:0032536 regulation of cell projection size GO:0042475 odontogenesis of dentine-containing tooth GO:0042592 homeostatic process GO:0044237 cellular metabolic process GO:0045669 positive regulation of osteoblast differentiation GO:0045879 negative regulation of smoothened signaling pathway GO:0046330 positive regulation of JNK cascade GO:0048144 fibroblast proliferation GO:0048568 embryonic organ development GO:0048812 neuron projection morphogenesis GO:0048864 stem cell development GO:0050768 negative regulation of neurogenesis GO:0050808 synapse organization GO:0051145 smooth muscle cell differentiation GO:0051384 response to glucocorticoid stimulus GO:0060033 anatomical structure regression GO:0060070 canonical Wnt receptor signaling pathway GO:0060425 lung morphogenesis GO:0060428 lung epithelium development GO:0060482 lobar bronchus development GO:0060484 lung-associated mesenchyme development GO:0060535 trachea cartilage morphogenesis GO:0060560 developmental growth involved in morphogenesis GO:0060669 embryonic placenta morphogenesis GO:0060710 chorio-allantoic fusion GO:0061180 mammary gland epithelium development GO:0071300 cellular response to retinoic acid GO:0072053 renal inner medulla development GO:0072054 renal outer medulla development GO:0072060 outer medullary collecting duct development GO:0072061 inner medullary collecting duct development GO:0072089 stem cell proliferation GO:0072205 metanephric collecting duct development GO:0072207 metanephric epithelium development GO:0072236 metanephric loop of Henle development |
InterPro families    | IPR005817 Wnt superfamily IPR018161 Secreted growth factor Wnt protein, conserved site IPR005816 Secreted growth factor Wnt protein |
Orthology group | MCL13608 |
Nucleotide sequence:
ATGTGTCGAGCCTCGCCAGCCGCGATAGCAGCTGTTGGAGACGGATTAAGAATGGCGTAC
GCAGAATGCCGTTCACAACTAAGTGGGTACAGATGGAATTGTTCTGGAGTAGGTAATGGA
AACGACTTTGGACACGTCATGCCTCTAGCTACGCGTGAGGCTGCATTTACTTACGCCATC
ACATCCGCGGGGGTCACGCACGCTTTGAGCACGGCGTGCGCTAGAGGGGACTTACCCGCC
TGTGGATGTTCGTCGAACAGACGTAGACCTTCGAGTCCATCAGAGCAGTTCCAATGGGGA
GGTTGTGGAGAGGCAGCCTATGGTGCGAGATTCGCGCGAAGGTTCCTTGATTCCAGAGAA
ATGGAAGCGGACGCCAGAAGTCTCATGAATCTTCACAACAACCGAGTAGGAAGAAAGACA
GTGAAGGACCTAGTTCGACGTGAATGCAAGTGCCATGGCGTATCAGGCTCGTGTGCGCTG
CGCACCTGCTGGCGGGCGTTACCCCAATTCCACGTGGTGGGCTCTGCTCTAAGGGAGAAG
TACCAGAAAGCTAGATTCGTTGTACCTCACCCACCAGCTGATACACACGCGCCACAAACA
CATCTTGTTATACGCAGAACGAGACAGAACGCAGGTGTCGGCCGCCAGCCTCGTAAATCC
GACCTGGTGTTTTTGGAGCCGTCGCCAACGTATTGTGAACCCGACGCTCTAGCCGGATCA
TTCGGTACTCACGGACGACACTGCAACAGAACCTCTAGAAGTGAAGAAGGCTGTGAAACT
CTGTGTTGCGGACGCGGTTACAACACAGTGAAGACTCAAGAAGAAACAAAGTGCCACTGT
CGTTTCCATTGGTGTTGTCGAGTGTCGTGCGACAAATGCGTCACTAAGAGCGAAATTCAT
GTTTGCAAATAG
Protein sequence:
MCRASPAAIAAVGDGLRMAYAECRSQLSGYRWNCSGVGNGNDFGHVMPLATREAAFTYAI
TSAGVTHALSTACARGDLPACGCSSNRRRPSSPSEQFQWGGCGEAAYGARFARRFLDSRE
MEADARSLMNLHNNRVGRKTVKDLVRRECKCHGVSGSCALRTCWRALPQFHVVGSALREK
YQKARFVVPHPPADTHAPQTHLVIRRTRQNAGVGRQPRKSDLVFLEPSPTYCEPDALAGS
FGTHGRHCNRTSRSEEGCETLCCGRGYNTVKTQEETKCHCRFHWCCRVSCDKCVTKSEIH
VCK