| New model in OGS2.0 | DPOGS212907 |
|---|---|
| Genomic Position | scaffold1590:+ 25924-27377 |
| See gene structure | |
| CDS Length | 762 |
| Paired RNAseq reads | 97 |
| Single RNAseq reads | 258 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013985 (4e-100) |
| Best Drosophila hit | CG13367 (5e-39) |
| Best Human hit | GATA zinc finger domain-containing protein 1 (3e-48) |
| Best NR hit (blastp) | PREDICTED: similar to GATA zinc finger domain-containing protein 1 (Ocular development-associated gene protein) [Tribolium castaneum] (6e-69) |
| Best NR hit (blastx) | PREDICTED: similar to GATA zinc finger domain containing 1 [Apis mellifera] (4e-66) |
| GeneOntology terms | GO:0046872 metal ion binding GO:0008270 zinc ion binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR000679 Zinc finger, GATA-type IPR013088 Zinc finger, NHR/GATA-type |
| Orthology group | MCL14049 |
Nucleotide sequence:
ATGCCTAAACCGACTTGTGTTCAATGTAATACAAACGATTCCCTACTATGGAGAAGCGCT
GAAAACGGACAAATATGCAACGAATGCCACTTAGCAAATACCGCAAGTAGTGAAACAAAT
TTAGATACGGCCATCAAAACCGAAAATGATGACAAGAAAGAAGACAAAGACGATTGTGAT
AGTAAGAATGGAAAAAATGAAGGCGAGACCACTCCAGCAAAAGCAACGGGTAAAGGTACG
AGGAAAAGCACTCGTTCTACAAGGTACAAAGCTAAAGGACCAACAGTGAACCAATCAAAA
CCACCGGCACCCCGTGGTAGAGGTCGCAGAAGTATATTTAAGAGACAACCATTAAAAGCC
CCAACAGCGACGGCTACAGTTGTTGCGAGTGAATCAGTATTTTTCAAGGGTACATACATT
CAAGTTGGCGATATCGTTTCAATGATTGACATTGACGGCGGCACATACTATGCACAGATA
AGAGGTTTCCTTACAGATCAGTACTGTGAGAAAAGTGCCGTAGTCACTTGGCTGCTACCA
ACACAGGCCAGTCCGCCCCCAGACCAAAGTTTTGATCCAGCTACATACATTATAGGTCCA
GAAGAAGATCTTCCTCGTAAACTGGAATACATGGAATTTGTAATGCATGCACCTTCAGAC
TACTATAAATCCAGTACAAGCCCATATCCCCTCACCGACAGGGAGCTAAATAACCAAAGT
GGTTTCATATGGACCTCTATGGAATCTAAGGAAAGAGGATAA
Protein sequence:
MPKPTCVQCNTNDSLLWRSAENGQICNECHLANTASSETNLDTAIKTENDDKKEDKDDCD
SKNGKNEGETTPAKATGKGTRKSTRSTRYKAKGPTVNQSKPPAPRGRGRRSIFKRQPLKA
PTATATVVASESVFFKGTYIQVGDIVSMIDIDGGTYYAQIRGFLTDQYCEKSAVVTWLLP
TQASPPPDQSFDPATYIIGPEEDLPRKLEYMEFVMHAPSDYYKSSTSPYPLTDRELNNQS
GFIWTSMESKERG