| New model in OGS2.0 | DPOGS214059 |
|---|---|
| Genomic Position | scaffold2017:+ 17430-22350 |
| See gene structure | |
| CDS Length | 1656 |
| Paired RNAseq reads | 111 |
| Single RNAseq reads | 292 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012404 (3e-72) |
| Best Drosophila hit | mutagen-sensitive 309 (1e-79) |
| Best Human hit | Bloom syndrome protein (5e-69) |
| Best NR hit (blastp) | PREDICTED: similar to blooms syndrome DNA helicase [Nasonia vitripennis] (3e-88) |
| Best NR hit (blastx) | PREDICTED: similar to blooms syndrome DNA helicase [Nasonia vitripennis] (4e-83) |
| GeneOntology terms | GO:0006302 double-strand break repair GO:0004003 ATP-dependent DNA helicase activity GO:0006974 response to DNA damage stimulus GO:0004386 helicase activity GO:0003678 DNA helicase activity GO:0000731 DNA synthesis involved in DNA repair GO:0005524 ATP binding GO:0045003 double-strand break repair via synthesis-dependent strand annealing GO:0008094 DNA-dependent ATPase activity GO:0032508 DNA duplex unwinding GO:0000739 DNA strand annealing activity GO:0005634 nucleus GO:0000732 strand displacement GO:0000403 Y-form DNA binding GO:0043140 ATP-dependent 3'-5' DNA helicase activity GO:0000724 double-strand break repair via homologous recombination GO:0007131 reciprocal meiotic recombination |
| InterPro families | IPR004589 DNA helicase, ATP-dependent, RecQ type IPR014001 DEAD-like helicase IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site |
| Orthology group | MCL11289 |
Nucleotide sequence:
ATGGATAACAACCCATTAACAGACTTATCAGATTTTAACAAAAAAATACTTTCACATCCT
CTCTATTTAAAGATTAGAGAAGGCAGGGTGTACACTTTTAATGAAGCAAATGAATTCAAA
AAACTGTATATAGAAGTATTAGAGAAATTGAGCGATGTGTTATATGTTTTAATCAACAAA
TTACCTGATTATGAAAGAAAAAGCTACACTTCAATTTTTACTGTGAAAGAGAAACTCCGA
AATATTTCAGCACAAGAAAATGTTGATTTTAATGACAAGTTATCACCTGAGAGTCGGAAC
ATTTTGGACTGTATAGATGATATGACACTCGCACCTAGAAATATAACAGAAAATAAGGAG
AATGTGCAGAACAATAGTGATGTGAAAATTCAGACGACTATATTACCTGATTCACTAAAC
CATGAGCAGAAAATCACAAAAAACTGTACTGAATCATATAATTCGGGTAATGGACGGAAA
CGAAGCTTCGTTTTCAAACTACCCTCACATCCCGGCGTTTTCAAAACACGTTGTTATTCG
TTAGAATTGCATAATAATCATAATTTTCAAACAGATGATATCGATCGAACCAACACTATA
GACTACCAGACTGAGACAACCAGACACATTGAGACTGAAGCTTTAAATGAATCAAAAGAT
TTAAACACCACCACCATTAACCAAGCCAACCCAGAGTCCAGAGTAAATAATCCTAACAAT
ATATGTAACAATTCAGATATAGATTTCGATCACTTTGAAGAATTTGAGGACATTAATTTC
CAAGACGATTGGTCTGATCATTTCAAAGAACCTTTGGAAATAGGAGATAGTAGTTTGTCG
AACAATGAAGAGTCAAATACAACAATTAATGTAAACTATGAAGATTCTATTGTAACATCC
AAGCAACCTTTGCCTGTACCAAGAAATATTCATAACAACAGTATAGGGGACTTCGGTAAT
ACTAGAAATGATGGAGTCACAGGTGAATTTGACGGTGATGATTATCCGCACTCGATCCCT
ATGATGGAGACTTTGAAAGAGAAATTTGGTCTCACATCTTTCAGACCAAATCAGAAGCAA
GTCATTAACGCAACGCTTTTAGGCCACGACTGTTTTGTTCTCATGCCGACCGGCGGGGGA
AAATCACTATGCTACCAGCTACCAGCGATACTGACCCCTGGCGTCACCATAGTCATATCA
CCACTGAGATCATTGATGTTGGATCAAGTCAACAAGTTATTAGCGCTGGATATTCCGGCC
GCACATTTAGGCAGTGACGTCACTGAGGCGAAGAGCAATTACGTGTATGACGATCTCAAC
CAACAGGAGCCCACTATCAAGCTCCTCTACGTCACACCCGAAAAAATACAATCGTCTCCA
AAATTTCAAGAAACTTTAACGAGACTCTACGAGAAGCAAAAGATTTCCAGGTTCGTGATC
GACGAAGCTCACTGTGTGTCGCAATGGGGTCACGACTTCCGTCCGGATTATCAAAAATTG
AATTTACTAAGGAAAAAGTTCCCTAATGTGACGCTAATGGCATTAACTGCGACGGCCACG
AAGCGAGTGCGCACCGACATATTGTATCAGCTGAAGTTTCAACCGTCCAAATCTCACGTA
CACGATTTTAACGAAGAAACAGAATCTGATAAATAA
Protein sequence:
MDNNPLTDLSDFNKKILSHPLYLKIREGRVYTFNEANEFKKLYIEVLEKLSDVLYVLINK
LPDYERKSYTSIFTVKEKLRNISAQENVDFNDKLSPESRNILDCIDDMTLAPRNITENKE
NVQNNSDVKIQTTILPDSLNHEQKITKNCTESYNSGNGRKRSFVFKLPSHPGVFKTRCYS
LELHNNHNFQTDDIDRTNTIDYQTETTRHIETEALNESKDLNTTTINQANPESRVNNPNN
ICNNSDIDFDHFEEFEDINFQDDWSDHFKEPLEIGDSSLSNNEESNTTINVNYEDSIVTS
KQPLPVPRNIHNNSIGDFGNTRNDGVTGEFDGDDYPHSIPMMETLKEKFGLTSFRPNQKQ
VINATLLGHDCFVLMPTGGGKSLCYQLPAILTPGVTIVISPLRSLMLDQVNKLLALDIPA
AHLGSDVTEAKSNYVYDDLNQQEPTIKLLYVTPEKIQSSPKFQETLTRLYEKQKISRFVI
DEAHCVSQWGHDFRPDYQKLNLLRKKFPNVTLMALTATATKRVRTDILYQLKFQPSKSHV
HDFNEETESDK