New model in OGS2.0 | DPOGS203515  |
---|---|
Genomic Position | scaffold2481:- 2377-8356 |
See gene structure | |
CDS Length | 999 |
Paired RNAseq reads   | 1304 |
Single RNAseq reads   | 4498 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004245 (7e-85) |
Best Drosophila hit   | mediator complex subunit 25 (5e-43) |
Best Human hit | mediator of RNA polymerase II transcription subunit 25 (6e-26) |
Best NR hit (blastp)   | PREDICTED: similar to Mediator complex subunit 25 CG12254-PA [Apis mellifera] (6e-72) |
Best NR hit (blastx)   | transcription factor, putative [Pediculus humanus corporis] (2e-61) |
GeneOntology terms    | GO:0016455 RNA polymerase II transcription mediator activity GO:0016592 mediator complex GO:0006367 transcription initiation from RNA polymerase II promoter GO:0007399 nervous system development |
InterPro families   | IPR021394 Mediator complex subunit Med25, PTOV activation and synapsin 2 |
Orthology group | MCL18489 |
Nucleotide sequence:
ATGGAGAAGGGGAAGACACCTGGGGATCAGCAGAAGGTCACCAAGCTGCTGCCCTGCCAG
GTATCGGCGAACTCCAAGGACATCGAGCCGGAGCTGAAGGTGGACACCTGGCCGAGCAAG
TTGCTGATGCAGTTGATGCCGAAGCAACTGATCAGCAACATCGGAGGCCAATACCTCAAG
GACAGCAAGTCTGTGCTGTTCCATCTGCAGCAGAACGAGGCTTTGGATGCCCTCACCAAG
GTTATGGTCAACGGTTTTGCTGGATGCGTACATTTCTCTCCGATGTCCTCACCACCGCAG
TGCGACATCAAAGTTTTGATACTCTTGTACACATCAGACAAAAAAGCTTTCTTGGGTTTC
ATCCCGAACAATCAAGCGACTTTCGTTGACAGGCTTAGAAAGGTGATCCAACAACAGAAA
ATGAACAAGCAAATTCCGGTTCCGGTGAGCGCGGCCGCCATGACCGGTAACATGCCCGCC
GCCACCATGGCTGGTAATTACTGTGATTATTTACAAAGTTTATCACGTTTCGGTATGATA
ATGGGAGGTGGAATGGCCGGTCAGGTGGGTCAGGTGGGGCAAGTCAACCAGGTCGGACAA
GTCAGTCAAGTCGGGCAAGTCGGTGGCAAGGGACCGCGCGGTGTTCCCCTGGACGGGCTG
GAGGCGGCCAGGCAACAGAACCTGGAGAAGATCCAGCACTTGCAGCAGACTCTGGAGGCC
GCTCACCAACAGGAAGCACAGTTCAAATCGCAGATGGACATCATGTCGCATTTACACGCG
GCACAACAACAGGAACAAGAGCAGCAACGCAAGCATCAACTGCAGCATCAGTTGCAGCAA
CAACTCCGCGGAGCGCAGCGAGGCATGAGACCCATCATGCCCACAAACCCTGGGCTTAGG
CATTTATTACAACAGCAACCGCAGTATCGCGCTGCGGGCACGGGCCGCCCGCCCGGACAG
CAGTTCGAGGACGTGGCGAACTACAACGACTTCCTATAA
Protein sequence:
MEKGKTPGDQQKVTKLLPCQVSANSKDIEPELKVDTWPSKLLMQLMPKQLISNIGGQYLK
DSKSVLFHLQQNEALDALTKVMVNGFAGCVHFSPMSSPPQCDIKVLILLYTSDKKAFLGF
IPNNQATFVDRLRKVIQQQKMNKQIPVPVSAAAMTGNMPAATMAGNYCDYLQSLSRFGMI
MGGGMAGQVGQVGQVNQVGQVSQVGQVGGKGPRGVPLDGLEAARQQNLEKIQHLQQTLEA
AHQQEAQFKSQMDIMSHLHAAQQQEQEQQRKHQLQHQLQQQLRGAQRGMRPIMPTNPGLR
HLLQQQPQYRAAGTGRPPGQQFEDVANYNDFL