| New model in OGS2.0 | DPOGS203552 |
|---|---|
| Genomic Position | scaffold2481:+ 12541-17990 |
| See gene structure | |
| CDS Length | 1743 |
| Paired RNAseq reads | 551 |
| Single RNAseq reads | 1524 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004249 (5e-38) |
| Best Drosophila hit | CG18155 (1e-27) |
| Best Human hit | acyl-CoA synthetase family member 3, mitochondrial precursor (6e-83) |
| Best NR hit (blastp) | PREDICTED: acyl-coenzyme A synthetase ACSM2, mitochondrial-like [Rattus norvegicus] (2e-108) |
| Best NR hit (blastx) | PREDICTED: acyl-coenzyme A synthetase ACSM2, mitochondrial-like [Rattus norvegicus] (7e-90) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0005739 mitochondrion GO:0006631 fatty acid metabolic process GO:0016878 acid-thiol ligase activity |
| InterPro families | IPR000873 AMP-dependent synthetase/ligase |
| Orthology group | MCL16731 |
Nucleotide sequence:
ATGGAGATCTCTATGCGTTCTGTACGTCTTTTGAACCGGCTTTTTCGTAAACCGTTGTCA
TTTTCTAGAACTATTTCTAACACAGCTGTGAAAGAAGAAATAAATGCTGAATTATTAAAT
TCCTTCAATCACGATATAAAAAAAGGAGGTGTAGTTCCAGTATTCAGAAGAGCTCTGCTG
TTTCCTACAAGAGTAGCATTACAAGATGACTTTGCAACTTATACATACGCTGATTTGTAT
GATGCAGCAACGGCGCTCAGCAAAGAAATTGCAGCACTATTATTGGGTGAAACTGAACGT
TCAATATGTTACATGTGTAACAATGATGCGAACCACGTTATTGTGCAGTGGGCGATATGG
ATGACGGGCAACATTGCCGTACCTCTAACCCCACTTCATCCTGAGGAGATGTTGAAGTAC
TTCATAATGGACAGTGATTCTAAACTGATCATATGTTCAAATGACTTTGAGAAAGTTTTG
AAGCCGATAGCAAAGGAATTGTCAAAGCCGATCTTACTTTCAAACAGATCGGAAAACTCT
GAAGAGAAAAAGACTGTGTTACAAGACGTAGATTTAACTAACAAATGGTATGGCGACAAT
GAGGCCATGCTTATTTATACAAGTGTTGAAAATTCATTGTTACAAGCAGGATTGAACCTG
CCACCTCCTGACTATGGGATTGCAGTGGCCCTGCTAACTGAGCTATCGATCCGTATGCTG
CCCAAGTTCACCTCTCACACCGTGTGGGCTAAACTGTTGGACTCGGACAAGGCCAAGGTG
TCAGTGTTCCACGGAGTGCCATCTATGTACAGTAAATTAGCGGCTGATTATGACAAAATG
TTCAGTGACAGTAAGACGGCAGCGTATGTGAAGAGTACACTGTCATCGAGGATGAGACTC
ATGTGCGCTGGGTCTGCACCCTTACCGGAGAGCCTGTTCAAGAAGTGGGAAGAGATATCC
GGACTAAAGCTATTAGAACGCTATGGTATGTCTGAGGTTGGTATGGCATTAAGTAACCCC
TACAGACCCCTAGAAGGAAGGTTGGTGGGCCGTGTGGGGGTCCCATTGCCCGGGGTCTCA
GCCAGAATAGCGGAATTCAAAGATAACATGATGGAAACCCTGGTTGATGTCACCGGAGAC
ATGCCAGATTTGCAAATATCTCTTGACAAGCTCGGTCTCACAGGGAGTCCGTCCATCAAG
GAGTTTGATAACGACTGGAAGGTCAATGAAACAAAATTAACAGACAGTGATGTGTGTGAA
GGGGAGTTATTATTGAAGGGTCCGGCTGTGTTCACTAGGTATTGGAATCGCGCGCCCAGC
GCCTTATCATCAGATTTCACTTCAGACGGGTGGTTCCGCACTGGCGATATGGCCTCCTTC
TCCCAGGGCACCTTCAAGATCATGGGCCGGACATCAGTAGACATCATTAAGACGGGAGGA
TACAAAGTCAGCGCCCTACAAGTGGAATCCGCCCTTCTTGAGCATCCAGACATATCAGAT
GTAGCCGTATTGGGTATACCTGACCAACATTACGGAGAGATTGTATCAGCGGTGGTCGCT
CTCAAGGAAGGTAGGAGTCTGACCCTGAGAGAGTTGAAAGATGAAGCTGGCAAGAGACTA
GCGCCGTACCAACTGCCAAAAACTATGGTTATAGTGGATCAGATGCCGAGGAACGCTATG
GGCAAACTTGACAAGAAGCTCATCAGACAGCAGTTTGGTGAGAAGTTGGTGTTTAAACAG
TGA
Protein sequence:
MEISMRSVRLLNRLFRKPLSFSRTISNTAVKEEINAELLNSFNHDIKKGGVVPVFRRALL
FPTRVALQDDFATYTYADLYDAATALSKEIAALLLGETERSICYMCNNDANHVIVQWAIW
MTGNIAVPLTPLHPEEMLKYFIMDSDSKLIICSNDFEKVLKPIAKELSKPILLSNRSENS
EEKKTVLQDVDLTNKWYGDNEAMLIYTSVENSLLQAGLNLPPPDYGIAVALLTELSIRML
PKFTSHTVWAKLLDSDKAKVSVFHGVPSMYSKLAADYDKMFSDSKTAAYVKSTLSSRMRL
MCAGSAPLPESLFKKWEEISGLKLLERYGMSEVGMALSNPYRPLEGRLVGRVGVPLPGVS
ARIAEFKDNMMETLVDVTGDMPDLQISLDKLGLTGSPSIKEFDNDWKVNETKLTDSDVCE
GELLLKGPAVFTRYWNRAPSALSSDFTSDGWFRTGDMASFSQGTFKIMGRTSVDIIKTGG
YKVSALQVESALLEHPDISDVAVLGIPDQHYGEIVSAVVALKEGRSLTLRELKDEAGKRL
APYQLPKTMVIVDQMPRNAMGKLDKKLIRQQFGEKLVFKQ