| New model in OGS2.0 | DPOGS211639 |
|---|---|
| Genomic Position | scaffold7218:- 3327-4791 |
| See gene structure | |
| CDS Length | 1344 |
| Paired RNAseq reads | 109 |
| Single RNAseq reads | 341 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011692 (7e-79) |
| Best Drosophila hit | ecdysoneless (2e-34) |
| Best Human hit | protein SGT1 isoform 1 (9e-35) |
| Best NR hit (blastp) | PREDICTED: similar to SGT1 protein homolog ecdysoneless [Tribolium castaneum] (6e-52) |
| Best NR hit (blastx) | PREDICTED: similar to SGT1 protein homolog ecdysoneless [Tribolium castaneum] (2e-50) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0045449 regulation of transcription GO:0005634 nucleus GO:0006350 transcription |
| InterPro families | IPR010770 SGT1 |
| Orthology group | MCL13345 |
Nucleotide sequence:
ATGCTCATTGAAGCCGCTGACTATTTGCCAGCTTGGGCCAATCCAGATACAACTGAAAAT
AGAGTGTTTCTTCAGAATAAACAGATCCATATTATACCTCCTGATTTAGCTGCAACTAAT
TCAAATCTCAATGTAGCTGATGCTATCAATTTAGTTGCACAAAACCCAAACATTACTAAG
GCCCCTGAAGAAATACAGAATGCTATATTAAGAAAAGTGGAAGGTTATCCTCAAAAAATT
CATAATAATTGTCATAATGCTATTTTAAAATTGCCCTTAGAAATAGCTGCTGTAATAAGT
TTGGAACCGACTTTAATATCACCTATAGTCCATACATATTGTAACCTAGATGCCTTAGAA
GCAAGGCAGTGTAAAGACATTAAATTTGACAACTGCGTTAATGTTAAAGTGAAATTTACG
AAATATTTATATGCTATGCTCCTGCATTCGCCGTTACTCAGTACAATTAAATACAAAGTA
TTGGAAAGTGACAAAAAAGGTCAAATGGGTTTAAAAATTGCATCCAGTTATAATATCATA
TTAAAGCAGTCTTGTGGAGAACCCTTTTCTACTATGGAATATCAAAGATTCATAGAGAGT
CTTTCTAAAAATGGTTACTTTAAGGATAACTTAGAAGGTTCGGTTCATTACAAACAATTA
CTAGAAAAAGCTAACAGTTATTTCTTGAATATGGAAAGTCCTATAACTTCTAATGCATGC
CATACAATCGAAAACATAAAATCTACAAGTGACTTTGAAAATATGAAGACATTCCTTAGA
AATGAAAGTGATTCAGGTGTTTTGGAAGACGATGATGCTTCGTGGCTTACTATTGACCCT
GATGAGTTGAATAATTTGTTAAATTACCAATATGGAAAGAAAGGTCATGTTAAAAATGAA
ACCGTTACTCCACATTTAATAACATCAGAGTTATCAAGCTTCCTTAAAAAGACATCAGAT
TATGAAGGGATAGAACAAGTAAATGATGATGTAGATAGTGATGATGGTGATATAGATTTT
GATTGCAAAGAATTTGTTACATGTATTGAAAAAATGCTCAAGATTGTAACAAATGATGAA
GAAACAAATTGTGATGATCAAGATATCAGTGGTGATGACTATTCAGATACGGAACGATAC
GAATTTGATACGAATCAAGATTTAGAATTGGCTGCAAAATTAAAAACATCTGTCGGAGAA
AATCTAAAAGATGATAAAAGTGTTGTGAACAATTTGGTACAAAGTATTAAAGAGGAAGGA
TTGTGTGGACCATCAAGTGTAGTTTTAAGGACTATTGGCATCAAAAAAAGTGATGTTCTA
GACTCTGATGATGATGATGAATAA
Protein sequence:
MLIEAADYLPAWANPDTTENRVFLQNKQIHIIPPDLAATNSNLNVADAINLVAQNPNITK
APEEIQNAILRKVEGYPQKIHNNCHNAILKLPLEIAAVISLEPTLISPIVHTYCNLDALE
ARQCKDIKFDNCVNVKVKFTKYLYAMLLHSPLLSTIKYKVLESDKKGQMGLKIASSYNII
LKQSCGEPFSTMEYQRFIESLSKNGYFKDNLEGSVHYKQLLEKANSYFLNMESPITSNAC
HTIENIKSTSDFENMKTFLRNESDSGVLEDDDASWLTIDPDELNNLLNYQYGKKGHVKNE
TVTPHLITSELSSFLKKTSDYEGIEQVNDDVDSDDGDIDFDCKEFVTCIEKMLKIVTNDE
ETNCDDQDISGDDYSDTERYEFDTNQDLELAAKLKTSVGENLKDDKSVVNNLVQSIKEEG
LCGPSSVVLRTIGIKKSDVLDSDDDDE