| New model in OGS2.0 | DPOGS211640 |
|---|---|
| Genomic Position | scaffold7218:+ 491-3110 |
| See gene structure | |
| CDS Length | 792 |
| Paired RNAseq reads | 506 |
| Single RNAseq reads | 1640 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011785 (4e-86) |
| Best Drosophila hit | CG10672 (1e-61) |
| Best Human hit | dehydrogenase/reductase SDR family member 4 (6e-52) |
| Best NR hit (blastp) | short-chain dehydrogenase [Heliothis virescens] (4e-104) |
| Best NR hit (blastx) | short-chain dehydrogenase [Heliothis virescens] (5e-100) |
| GeneOntology terms | GO:0016614 oxidoreductase activity, acting on CH-OH group of donors GO:0055114 oxidation reduction GO:0005488 binding |
| InterPro families | IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR020904 Short-chain dehydrogenase/reductase, conserved site |
| Orthology group | MCL12295 |
Nucleotide sequence:
ATGTTTCGCCCAAGATTAGTTGCCTCACAGAATGTGCTACCAAAATTATTTCCCCAGGCA
GTTAAAGCCAATAGCTTTCACAGTAACCGATTGAAGGGAAAAGTAGCTATAGTTACTGCA
TCCACAGATGGGATTGGATATGCAATAGCCAAGCGCTTAGGCGATGAGGGTGCCTCAGTA
ATTATAAGTAGTAGAAAGGAAGATAACGTTAAGAAGGCTACAGACAGCTTACGAAAAGAT
GGAATAAATGCAGAAGGACTTGTATGTCATGTTGGTAATGCAGATCAAAGAAAAAAATTA
TTTGAATTTGCCAGCCGTAAATTTGGTGGGATTGATATTCTTGTATCAAATGCTGCTGTT
AACCCAGCTGTGTCACCAATTTTGGAGACAGATGAGAAAGTTTTCGACAAAATATTTGAG
GTGAACCTTAAATGTTCATGGTTATTGGCAAAAGAAGTTTATCCAGAACTACAGAAGCGT
GGAGGTGGAAATATTGTATTCATTTCATCAATCGCTGGATATCAAGCTATGGAACCTCTG
GGACCATACAGCATTAGTAAAACTGCCATTATTGGCTTGGCTAAGGCAATAGCCGGTGAA
GTAGTGCATGAAAATATAAGAATAACATCAAACGAAATAGGTAAAGAGAAGAGTTTGTCT
ATAGTGCCCATGAAAAGATTCGGTCAACCCTCTGAGATAGCTGCAGCTGTAGCGTTCCTT
GTGTCAGATGACTCTAGTTATATAACGGGAGAAACCTTAGTTGTAGCTGGAGGGACATAC
GCTCATCTATAA
Protein sequence:
MFRPRLVASQNVLPKLFPQAVKANSFHSNRLKGKVAIVTASTDGIGYAIAKRLGDEGASV
IISSRKEDNVKKATDSLRKDGINAEGLVCHVGNADQRKKLFEFASRKFGGIDILVSNAAV
NPAVSPILETDEKVFDKIFEVNLKCSWLLAKEVYPELQKRGGGNIVFISSIAGYQAMEPL
GPYSISKTAIIGLAKAIAGEVVHENIRITSNEIGKEKSLSIVPMKRFGQPSEIAAAVAFL
VSDDSSYITGETLVVAGGTYAHL