| New model in OGS2.0 | DPOGS202164 |
|---|---|
| Genomic Position | scaffold1548:- 11654-14285 |
| See gene structure | |
| CDS Length | 888 |
| Paired RNAseq reads | 1840 |
| Single RNAseq reads | 5052 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003307 (1e-23) |
| Best Drosophila hit | CG10277, isoform C (3e-21) |
| Best Human hit | E3 ubiquitin-protein ligase RNF167 precursor (2e-21) |
| Best NR hit (blastp) | PREDICTED: similar to CG10277-PA, isoform A [Apis mellifera] (9e-67) |
| Best NR hit (blastx) | PREDICTED: similar to CG10277-PA, isoform A [Apis mellifera] (1e-40) |
| GeneOntology terms | GO:0005515 protein binding GO:0008270 zinc ion binding GO:0046872 metal ion binding |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type IPR018957 Zinc finger, C3HC4 RING-type |
| Orthology group | ND |
Nucleotide sequence:
ATGTCGCTGGCGGTCGGTTACCGGGGTCGTTCGTTACTGATCACGGCACACATGGCGTCT
CTCAGCTGGTACACTTGTTATATTTCCAGTTACTACATCATGGTGAACGGCGACATACCC
TTCAACATCAACACGCACCTCCTGCTGCCGTTCGCCGTAGTGGTGGTGCTGTGTCTCGTC
GTCATACTCATCTTCATGATAGTGAAATGTATAAAGGACCGGCGGAGGGCGCGGAGACAC
CGGCTGCCGAACCGCTCCTTGAAGAAGATCCCCACCTGCAAGTTCAGCAAGGGGGATCCC
TACGACACTTGCGCCATCTGCCTCGACGACTACCAGGAGGGGGAGAGGCTCAGGGTGCTG
CCCTGTGCTCACGCGTATCACGCGAAGTGTATCGACCCGTGGCTGACTCAGAACCGTCGC
GTGTGTCCCGTGTGTAAGCGGAGAGTTTTGGCGGCGGACGAGCGGGCGGCGGACCTGGAC
CTGGACCAGGACTCGGACGACACGCAGCCGCTGCTGGACAGGGGAAACGACACACAGGGT
GGTACATTTCAAGAGCAACGTGAGAATCCCTTCGTGAGGGCCGCGAGGTATATATATAGC
TTACGAGGGAGGAACGAACCTGGAGACGAACACGACCCTGAGGTGGCTCGACCTACCGAA
GACGGCAACACTAACAATGAAGACAATGCTCCGGAGACAGCTCCCCTGGTGCCTCAGTCG
GAGCCCGGCCGTCGCCGCGGACGGAGGTCTCGCCGGCGTGCGCGACTTCAACACACACAC
TCGAACATGACTCGCTCAGTCAACGACGACTCCACGGACGACGACGGGGAAATAGTCGTG
GCAGCCCTGCCAGCGCAGTCCTCCGAGCCGCATTACATAGATTTATGA
Protein sequence:
MSLAVGYRGRSLLITAHMASLSWYTCYISSYYIMVNGDIPFNINTHLLLPFAVVVVLCLV
VILIFMIVKCIKDRRRARRHRLPNRSLKKIPTCKFSKGDPYDTCAICLDDYQEGERLRVL
PCAHAYHAKCIDPWLTQNRRVCPVCKRRVLAADERAADLDLDQDSDDTQPLLDRGNDTQG
GTFQEQRENPFVRAARYIYSLRGRNEPGDEHDPEVARPTEDGNTNNEDNAPETAPLVPQS
EPGRRRGRRSRRRARLQHTHSNMTRSVNDDSTDDDGEIVVAALPAQSSEPHYIDL