| Genomic Position | scaffold1548:+ 26188-30848 |
|---|---|
| See gene structure | |
| CDS Length | 2562 |
| Paired RNAseq reads | 636 |
| Single RNAseq reads | 3219 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003437 (7e-73) |
| Best Drosophila hit | CG42269, isoform E (2e-63) |
| Best Human hit | solute carrier family 22 member 5 (7e-20) |
| Best NR hit (blastp) | PREDICTED: similar to putative reverse transcriptase [Strongylocentrotus purpuratus] (5e-82) |
| Best NR hit (blastx) | PREDICTED: similar to putative reverse transcriptase [Strongylocentrotus purpuratus] (3e-82) |
| GeneOntology terms | GO:0008513 secondary active organic cation transmembrane transporter activity GO:0016021 integral to membrane GO:0055085 transmembrane transport |
| InterPro families | IPR000477 Reverse transcriptase IPR016196 Major facilitator superfamily, general substrate transporter IPR005828 General substrate transporter |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGATACTTCTAATAAAGCGAATTCTATTGAAATCGAAGATATTAGTACCGCTTTAGAG
AAAGTTTTAAGTCACGTGGGGGAGTTGGGGACATATCAAAGGTGGCTATTCCTTGTGATG
CTGCCCTTTGGAATGGTGTGGTCTTTCGGTTATTTTGGTCAGATGTTTATCACAGCAACT
CCCCAAGAGCATTGGTGCAGGGTGCCAGAATTAGATGGATTGAGTGCCGATCTTAGGAGG
TCTCTGGCAACACCGAAGGATTCTAACAATGTGTATGATAATTGTAACATGTTTGTTGCT
AATTATACGCTTGTTTTGGAAACGCTGCTCCCGCCGGACCCTGGCACCCCGACTATGCCT
TGTGATAACGGCTGGGAGTTCTTATTTGAAGACATACCATATTCTACTATCGTCAATGAG
CGTGAATGGGTATGTGATAGATCAAACTTAGTGCCGTGGTCTCAAACAATCGGTTTCCTT
GGATCAATCGTGGGTGGAGTTTTGTGTGGAACTTTGGCTGATAGGTATGGAAGATTGCCA
GTTTTAATTTGGAATTTGTCAATTGCCATGTACTTTGGTGGTGGATGCCTCTTGATGCCA
TGGCTCGCTCTCTGGATCGCTGATTGGAAGTACTTTGTTCTGGCTACCTCTTTGCCAGCG
TTGCTATCCTTGCTAACACCGTTCTTGGTGCCAGAGAGTGCGCGATGGTTAGTGTCGAAA
GGCAGAACCGACGAAGCAGTGAAGGTGCTCAAACGATTCGAAAGGATAAACAAGTCTAAG
ATACCAGAAGAAGTTCTGGAGGAATTTATTTCTATTGCAGGTAAAACAAAGAATGAGGAG
GAAAGCGTTTTGACTATATTCAAGACTCCGTCGCTGCGTGTTACGGTGATTTTTTTGATC
ATGACTTTCATGGGTGTTGCTGTCGTGTTCGACGGTATCATCCGGCTCTCTGAAAACCTC
GGCTTGGACTTTTTCCTGACCTTCACTGTGACCTCAGCTACAGAGATTCCATCGATTCTC
ATCCTGATCGTCTTATTAGACAGTTCAAAACTCAATCTAGATATCAAATCACTCGTACCA
TCGTGTGCAAAACCTCCAAAATTGTATGGGTTACCTAAAATCCATAAACAAGATGTTCCA
TTACGCCCAATAGTAAGCCAGATTGACTCACCCACTTATAAACTGGCTAAATTTCTTTCA
AAAATATTATCACCTCTCCGGGGCCACACAAAGTCATTTGTTAAGGATTCCTACCAGTTT
GTCAAAGATTTAAAACACCTAAAATTGAGCGACAATGACAGTATGGTCAGTTTCGATGTA
CAGTCATTATTCACTAGTATACCTGTTCTTGACTGCATTGAGATTGTAAGAGGTAAGTTA
AAGGATAACAATATGCCTATAGAATATGCAGAGCTATTAAAGCATTGCCTAACATCTGGC
TACCTCATGTGGAAGGATGAATTCTACATACAAGTAGATGGAGTTGCAATGGGTTCACCG
GTTTCCCCCGTTGTCGCTGACATATTCATGGAGGACTTCGAGGTGCGAGCCCTTTGCTCT
CCTCCTATAAGACCTTTAATTTATAAACGGTATGTAGATGACACCTTCACAATATTAAAT
AAAAATAAAACATCTGCTTTTCTGAACCATCTCAATTCTATCAATAGTAAGATTCAGTGT
ACTATAGAATTGGAGGCAAATAATTCTTTAGCTTTCCTTGATATACTTGTTGTTAGGAAT
CCTGACAATACTTTGGGACATACTGTTTATAGGAAACCCACACATACGGACAGGTACCTC
AATGGTTACTCACACCACCACCCTATCCAGTTAGCTACCGTTGGCAAATCTTTGTTACAG
AGAGCCCAACATCTTTGTGATGCTGACCACCTAGAGGCCGAGCTGCAGCATGTAAAACAT
GCTCTCACTATCAACAACCTGCCCGTGCCTCGCCAGCATCGCAAGAAGCACCTGAAGCCA
CCCACAGTTGAACGACAACCTGCGATACTACCATATGTGAAGGGAGTTACTGACAGAATA
GGCAACATCTTGAAGAAGGTTTCCATTAAAACTATTTACAAACCACATAAGAAAGTGAGC
CAATTCTTGAGACCAATCAAGAGTAACATTCCTTTACAACAAGCGGGTGTATACAAACTC
GACTGTGACTGTGTCTTGTCATACATTGGACAGACGAAGAGGAGCATCGGTACAAGGGTT
AAGGAACACATCTCAGATATCAAAAACAGGCGCGCGTCGAAGTCAGCAGTGTGTGAACAC
ACAATGGACAAACCAGGCCACTACATTCGTTTTGATAAACCTCAAATCCTCGCTCGGGAA
GACAAGTATATACCGAGATTAATTCGCGAGGCTATTGAAATTAAAAAACATCCCAATTTC
AATAGAGAAGATGGCTGGAATCTTTCAAACACCTGGGACCCCGTTCTTAAAAATATAAAA
TCCCATGTCCGTAACCACACCGCAGGACCTCAAGACACCGTGAGCGCATTCTGCCGGCAT
CCAGAGCGGTACGCCAGAAAATTAAGAAATCGATGGCGGTAG
Protein sequence:
MDTSNKANSIEIEDISTALEKVLSHVGELGTYQRWLFLVMLPFGMVWSFGYFGQMFITAT
PQEHWCRVPELDGLSADLRRSLATPKDSNNVYDNCNMFVANYTLVLETLLPPDPGTPTMP
CDNGWEFLFEDIPYSTIVNEREWVCDRSNLVPWSQTIGFLGSIVGGVLCGTLADRYGRLP
VLIWNLSIAMYFGGGCLLMPWLALWIADWKYFVLATSLPALLSLLTPFLVPESARWLVSK
GRTDEAVKVLKRFERINKSKIPEEVLEEFISIAGKTKNEEESVLTIFKTPSLRVTVIFLI
MTFMGVAVVFDGIIRLSENLGLDFFLTFTVTSATEIPSILILIVLLDSSKLNLDIKSLVP
SCAKPPKLYGLPKIHKQDVPLRPIVSQIDSPTYKLAKFLSKILSPLRGHTKSFVKDSYQF
VKDLKHLKLSDNDSMVSFDVQSLFTSIPVLDCIEIVRGKLKDNNMPIEYAELLKHCLTSG
YLMWKDEFYIQVDGVAMGSPVSPVVADIFMEDFEVRALCSPPIRPLIYKRYVDDTFTILN
KNKTSAFLNHLNSINSKIQCTIELEANNSLAFLDILVVRNPDNTLGHTVYRKPTHTDRYL
NGYSHHHPIQLATVGKSLLQRAQHLCDADHLEAELQHVKHALTINNLPVPRQHRKKHLKP
PTVERQPAILPYVKGVTDRIGNILKKVSIKTIYKPHKKVSQFLRPIKSNIPLQQAGVYKL
DCDCVLSYIGQTKRSIGTRVKEHISDIKNRRASKSAVCEHTMDKPGHYIRFDKPQILARE
DKYIPRLIREAIEIKKHPNFNREDGWNLSNTWDPVLKNIKSHVRNHTAGPQDTVSAFCRH
PERYARKLRNRWR