| New model in OGS2.0 | DPOGS206596 |
|---|---|
| Genomic Position | scaffold7926:+ 957-4451 |
| See gene structure | |
| CDS Length | 1353 |
| Paired RNAseq reads | 4821 |
| Single RNAseq reads | 12552 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011982 (4e-09) |
| Best Drosophila hit | CG42611, isoform A (2e-35) |
| Best Human hit | prolow-density lipoprotein receptor-related protein 1 precursor (2e-44) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (4e-78) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (5e-93) |
| GeneOntology terms | GO:0005509 calcium ion binding GO:0005887 integral to plasma membrane GO:0030136 clathrin-coated vesicle GO:0030425 dendrite GO:0005515 protein binding GO:0005737 cytoplasm GO:0004872 receptor activity GO:0042157 lipoprotein metabolic process GO:0045768 positive regulation of anti-apoptosis GO:0034185 apolipoprotein binding GO:0032403 protein complex binding GO:0032370 positive regulation of lipid transport GO:0002020 protease binding GO:0005624 membrane fraction GO:0070325 lipoprotein receptor binding GO:0030178 negative regulation of Wnt receptor signaling pathway GO:0043277 apoptotic cell clearance GO:0005905 coated pit GO:0043025 neuronal cell body GO:0005886 plasma membrane GO:0008034 lipoprotein binding GO:0005768 endosome GO:0006898 receptor-mediated endocytosis GO:0008283 cell proliferation GO:0032429 regulation of phospholipase A2 activity GO:0032374 regulation of cholesterol transport GO:0007275 multicellular organismal development GO:0005319 lipid transporter activity GO:0006629 lipid metabolic process GO:0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway GO:0010875 positive regulation of cholesterol efflux GO:0007568 aging GO:0005634 nucleus |
| InterPro families | IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site |
| Orthology group | ND |
Nucleotide sequence:
ATGGCTTATATGACATCATCACAACATCTCACTTGCCATTGCGGTAAACAAAACTGTACG
GAGAACCAGTTCCAGTGTGCCAACGGGAATTGCATCGAGAAAAGATGGGTTTGCGACGGA
GATAACGACTGCAAAGATGGCTCTGATGAACGGAATTGTACGCAAAGTCTACCAAAACGT
CCGGTAACGGTCAACTGTTCCGGTCACGTGTTCGCTTGCTCTAATGACACAAACGCTCTT
TGTATACCGAACTCATGGGTTTGTGATGGAGAGAGAGACTGTCTCGGTGGTGAGGATGAG
ACAGAGGAGAGATGTACCAACTCCACCTGCGCCCCCTATATGTTCAGATGTCCTAGCGGA
AAGTGCATTTATATGTCATGGGTTTGTGACGGCGAGAACGATTGCAGCGACGTAGATTCA
TCAGACGAGAAGAACTGTACCTCTATCGGCCACTCTAAGCTGATACCTCGACCTACGGAA
AAACCAGATTTCGGTACCAAAGGTTCCTGCTTAGAATGGATGTTCAAGTGCGACAACGGC
GTCTGTCTGCCGTATTGGTGGAGATGCGACGGCACCAACGACTGCGGCGATAACTCGGAC
GAGGCGGCGTGTGGCCTGCGACCCGACAACAAGACACACATAACGCCGGAGCGGGAGGTC
AAACAGAAGTGCGCCAAGAACCAGTTTACCTGTGAACCCGGTGTGTGTATACCACTGACG
TGGGTTTGTGACTCCGTTAGTGATTGTATCGACGGATCCGACGAGTCGGGCTGCGATCGG
AGACACGACAAAGGAGATACCGGTCTGCGGTGCGAGCCCGCGGCCACGCCGTGCGCTGAC
GGCTCGGCCTGCATTGGCGACCACCAGCTGTGTGATGGAGTCATCGACTGTGGGGATCAC
AGTGACGAAATGCACTGCGGCACCCAGAAGCCAAAATCTCCTGTGAGTTGTCCTCCACGA
TACTTCGAGTGTGACGAGGGGACTCGCTGTCTGTGGCAAGCGATGGTGTGTAACTGGCAT
CAGGATTGCTACGACGGCAGCGACGAGGCCAATTGTACCAGCAATAATAATAATAATAAC
GTCTATCAGTATCTAAGCATCGGCGTAGACCAGTCGTCGATAAACTCAACCAGCTTCCTG
ATATCGTGTTGGATGGCGCAGCAGAGGACTGTGATGTATAACTTCCTGCCGTCCATCTCC
AAGGTCGACGATGGAGTGTGGAAGAACATGACATGGACCAATGACAGCGTCTACAGGTAT
ATTATGGCCAATGAAAGGCTCCGATTGGTCTGGTACTCGCAGCTGATTGGTTATTTTCTA
TATTCTAATCTTCTGTGGTGTTTTCATCTATAA
Protein sequence:
MAYMTSSQHLTCHCGKQNCTENQFQCANGNCIEKRWVCDGDNDCKDGSDERNCTQSLPKR
PVTVNCSGHVFACSNDTNALCIPNSWVCDGERDCLGGEDETEERCTNSTCAPYMFRCPSG
KCIYMSWVCDGENDCSDVDSSDEKNCTSIGHSKLIPRPTEKPDFGTKGSCLEWMFKCDNG
VCLPYWWRCDGTNDCGDNSDEAACGLRPDNKTHITPEREVKQKCAKNQFTCEPGVCIPLT
WVCDSVSDCIDGSDESGCDRRHDKGDTGLRCEPAATPCADGSACIGDHQLCDGVIDCGDH
SDEMHCGTQKPKSPVSCPPRYFECDEGTRCLWQAMVCNWHQDCYDGSDEANCTSNNNNNN
VYQYLSIGVDQSSINSTSFLISCWMAQQRTVMYNFLPSISKVDDGVWKNMTWTNDSVYRY
IMANERLRLVWYSQLIGYFLYSNLLWCFHL