| New model in OGS2.0 | DPOGS207250 |
|---|---|
| Genomic Position | scaffold614:- 85930-101923 |
| See gene structure | |
| CDS Length | 2841 |
| Paired RNAseq reads | 346 |
| Single RNAseq reads | 962 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012067 (2e-66) |
| Best Drosophila hit | multiplexin, isoform E (2e-77) |
| Best Human hit | collagen alpha-1(XV) chain precursor (1e-45) |
| Best NR hit (blastp) | PREDICTED: similar to collagen alpha 1(xviii) chain [Tribolium castaneum] (7e-125) |
| Best NR hit (blastx) | collagen alpha 1(xviii) chain [Aedes aegypti] (2e-107) |
| GeneOntology terms | GO:0005581 collagen GO:0007155 cell adhesion GO:0005198 structural molecule activity GO:0031012 extracellular matrix GO:0005488 binding GO:0008045 motor axon guidance |
| InterPro families | IPR016186 C-type lectin-like IPR016187 C-type lectin fold IPR010515 Collagenase NC10/endostatin IPR008160 Collagen triple helix repeat |
| Orthology group | MCL12955 |
Nucleotide sequence:
ATGAAATGGATTTGGTTACGTGTTGTAATACTTCTCGTGGTACAGGGTGCCTTTCAAGAG
CTCAAGCTTTATGGCTCTCCATCGCAAGCGGAAGTGCAATGTGTTAATACATACGAGGAA
ATAGGTAAAAGCAGCGAGGGAGATGAAATCGATATTGACAATTTTTTGGTCGACCAGGAG
GAAGGAGATTCAGAGGGTTCAGGGCGGTATGGGACCATACCACCGTTTCCACCACCACCA
CCAGGAATGGATGGGTATCCTTTGCGGCTTCGAGGAGAAAAGGGAGAAAGAGGACCAAGG
GGTCCGCCTGGGGAATCTATACGTGGCCCTCCTGGGCCACCAGGCCCTCCCGGTCCTCCT
GGCGTAAACACCGTCTCGGAAACTTCAGGGTCCGGAGATGACCAAATTTTTGGAGAAAAT
TACGCATCGCTCGGTCATTGTGGATGCAATTCAAGTGTTTTATTATCACTTTTGGAAATT
GCTCCCGAACTTCAAGGCCCTCCAGGTCCTCCTGGTATAACGGGGGCTGACGGATTAACA
GGTGCTCCTGGAATACCTGGACAACCTGGCATGCCTGGAGAGAGAGGTTCAATCGGCCAA
CGAGGCGAAAAGGGTGATAGAGGTGACAGTGGACCACGAGGATCAGAGGGTCAACCAGGT
CCTAAGGGAGAGCCAGGTGTAGATGGAAGACCTGGAAGTCCGGGACCACCAGGTCCACCA
GGAACACCTGGCTCTTCTGATTATAACAACTTTGATGAATCATTACTGGGTTCATACGGT
GGAGCAATTGGAAGACCAGGTGCCCCGGGGCCTAAGGGAGATGCAGGTCAACCTGGACCT
ATAGGACTACAAGGAGAACGGGGATTCCCTGGACCCAAAGGTGAAAGAGGGCAAATAGGA
CAAACAGGAGCCAAAGGTGACCGTGGACATCCTGGCCACAAGGGAGATAGAGGAGTAAAG
GGAGATCGAGGTAATCCAGGACTAGATGGGCGTTCTGGTCTACCGGGAGCCAATGGACGT
TTTGGAGAAAAAGGAGAAAAGGGAGAACGAGGCATACCTGGTCCACCGGGACCGCCATCC
CTACCCATAGGAGTTGTTGCTTCGGAAGAACCGGAATTTCTGGCGACAGGTTTACGACAC
TTAGGACCAGCTGAAAAAGGAGAAAAGGGAGAGAAGGGGAGTCGAGGAAATGACGGAACA
TCAGGTTTTCCTGGAAAAGATGGTAAGCCAGGCGAAAGGGGTGATATAGGTCCCTCTGGT
TTACCAGGTATTGCAGGTCCTCCAGGGAGCCCAGGTCTAAAGGGTGACAGAGGAGAAAGA
GGTCCTCCAGGCCCTGTCAGTTTAACATCTGCCGGCTCTGATATTCTAACAATCAAAGGT
GAAAAAGGTGAACCAGGCTTAAGGGGCCGAAGAGGACGACCTGGTCCACCTGGGCCGCGA
GGAGCCCAAGGACTTCAAGGCTTAGTTGGTCCAACCGGAAAACCGGGCGAAAAAGGTGAC
ATTGGTTTACCTGGTTGGATGGGACGACCAGGAACATTAGGACCACCGGGAATTCCAGGC
CCAGTAGGACCAAAGGGAGAAAAAGGGGACCCTGGAGTGAATATATTAGATGTCTCAATG
GGAGAAAAAGGAGACCGAGGATTAGAGGGGATATCTGGTCCGAAAGGAGAGCAGGGTCCT
ATTGGACCTCCAGGTCCACCTGGTCCCGGTTCTAGATCAGAAGCAGTACAATATATTCCT
GGACCACCAGGGCCTCCAGGACCACCAGGGCAACCTGGAACTCCTGGAATATCTATTGTC
GGACCCAAGGGTGAACCTGGAGTTAGCTACCTAGAAGAATATCCTGTGCATGGAAGCACG
AAATACTTTGGTAGACCAGCCTCTCCAGAATATCGACCTCATCAAGACGAAATGAACGCC
AACAAGAATGTACCAGGCGCTCTGGTATTCCACACTACGGAAGAGATGCTACGGCTTGCG
TCAACAAGTCATCTTGGAGCACTTGCGTATGTGATTGAAGAACAATCCCTTTTTGTAAAG
GTTAACTCAGGCTGGCAGTACGTTTTGTTAGGTTCCCTAGTGACGCAATCAGCTCTCCAT
ACAACAACAACGTCTGCTCCGGCACCACCACCACTACTGCCGGCTGCAAGCCTTGTGCAT
GCACCTTTATCAAACATGGTGGATACGCCTCTAGCTCCCATGGGACCTAGTCTCCGTCTA
GCCGCTCTGAATGAGCCGCTGTCCGGCGACATGCATGGCATACGCCGTGCTGACTATGCC
TGCTACCGACAAGCTCGTCGAGCTGGCCTGAAAGGAACATTCAGGGCCTTTCTTACAAGC
AGAATACAAAACTTAGATTCCACAGTGCGATATGCTGATAGGCATTTGCCAGTTATCAAC
ACTCAGGGTGACGTCCTATTCCAATCATTCTCAGATATTTTTGATGGAAATGGTGGTGTG
ATAGCTGGATCCCCAAGGATATACAGCTTTAGCGGAAAGAATATAATGCTTGATTCAAAC
TGGCCTCAAAAGCTCATCTGGCACGGATCTCATGCGAGCGGAGAACGAGCTCTGGAGACT
TTCTGTGAGGAGTGGCAGAGCGCTGATCCCTCATCCCGTGGCATGGCCGCCTCGTTACAT
TCACACCGACTTTTGTCTCAGGAGAGATATTCCTGTAATAACCACTTTGCAGTATTATGT
ATTGAAGCTACTTCGCACTTGAGTGTTCGAAGAAAACGAGAGATAGCAAGGTACAACATG
TCTTCGGTGAATGACGAGTATCATCCGTACAACGCTGAAGAATATCAAGACTTGTTAAAT
GAGATATTCGGACAACCATAA
Protein sequence:
MKWIWLRVVILLVVQGAFQELKLYGSPSQAEVQCVNTYEEIGKSSEGDEIDIDNFLVDQE
EGDSEGSGRYGTIPPFPPPPPGMDGYPLRLRGEKGERGPRGPPGESIRGPPGPPGPPGPP
GVNTVSETSGSGDDQIFGENYASLGHCGCNSSVLLSLLEIAPELQGPPGPPGITGADGLT
GAPGIPGQPGMPGERGSIGQRGEKGDRGDSGPRGSEGQPGPKGEPGVDGRPGSPGPPGPP
GTPGSSDYNNFDESLLGSYGGAIGRPGAPGPKGDAGQPGPIGLQGERGFPGPKGERGQIG
QTGAKGDRGHPGHKGDRGVKGDRGNPGLDGRSGLPGANGRFGEKGEKGERGIPGPPGPPS
LPIGVVASEEPEFLATGLRHLGPAEKGEKGEKGSRGNDGTSGFPGKDGKPGERGDIGPSG
LPGIAGPPGSPGLKGDRGERGPPGPVSLTSAGSDILTIKGEKGEPGLRGRRGRPGPPGPR
GAQGLQGLVGPTGKPGEKGDIGLPGWMGRPGTLGPPGIPGPVGPKGEKGDPGVNILDVSM
GEKGDRGLEGISGPKGEQGPIGPPGPPGPGSRSEAVQYIPGPPGPPGPPGQPGTPGISIV
GPKGEPGVSYLEEYPVHGSTKYFGRPASPEYRPHQDEMNANKNVPGALVFHTTEEMLRLA
STSHLGALAYVIEEQSLFVKVNSGWQYVLLGSLVTQSALHTTTTSAPAPPPLLPAASLVH
APLSNMVDTPLAPMGPSLRLAALNEPLSGDMHGIRRADYACYRQARRAGLKGTFRAFLTS
RIQNLDSTVRYADRHLPVINTQGDVLFQSFSDIFDGNGGVIAGSPRIYSFSGKNIMLDSN
WPQKLIWHGSHASGERALETFCEEWQSADPSSRGMAASLHSHRLLSQERYSCNNHFAVLC
IEATSHLSVRRKREIARYNMSSVNDEYHPYNAEEYQDLLNEIFGQP