New model in OGS2.0 | DPOGS207304  |
---|---|
Genomic Position | scaffold614:+ 248-7108 |
See gene structure | |
CDS Length | 1539 |
Paired RNAseq reads   | 668 |
Single RNAseq reads   | 1848 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012034 (3e-22) |
Best Drosophila hit   | CG2685 (2e-39) |
Best Human hit | WW domain-binding protein 11 (6e-30) |
Best NR hit (blastp)   | conserved hypothetical protein [Pediculus humanus corporis] (5e-82) |
Best NR hit (blastx)   | conserved hypothetical protein [Pediculus humanus corporis] (1e-56) |
GeneOntology terms    | GO:0006396 RNA processing GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
InterPro families   | IPR019007 WW domain binding protein 11 |
Orthology group | MCL13614 |
Nucleotide sequence:
ATGGGGCGACGTTCAATAAATACCACCAAGAGTGGTAAATATATGAACCCTACTGACCAA
GCACGAAAAGAAGCTAGAAAAAAGGAATTAAAGAAGAATAAAAGACAAAGACAAATGGTC
CGGGCTGCAGTGCTTAAAATGAAAGATCCAACTCAAATACTTGAAGAACTGCAGAAAATT
GATGAAATGGAGTACAATGTCCTTCAGCCGTCACCTCTTAATGAGAAAGTACTTAAAGAG
AAAAGAAAAAAGCTAAAGGAAACCTTTGACAGGGTTCTGAAGATGTATGATAAAGATGAT
CCAGAAAAATGGGTGGAGCTAAAGAAACAGGAGATGGAATATGAAACGCGCAGGGCTCAT
TTAATATCATACTATGAATCTGTGAAACATGCACAATCTGTGCAAGTTGATGACATCCCT
TTACCCACACTGCAGGTTCCTGACAATCTTATTTATGGGAATGTGCCCTCACAGATACCA
CTGCCCATAGATTCAATACATCCAAATTTACCAGTTCGACCTATACTGAAAAAGGACTCT
GTATATAGAGAGAGGCCGTCAGGTGTTGAGCCTCCTGGAGTGCCTCCCGGCCCGCCACCG
GATTTGGAGTCGTTACTCGGCCTTGAAAGCAACAAGAAGGACAAACACAAGGAAAAGAAG
AGCATCCGATTCTCAGATCTACCAGACGAACCTCCGGGAGAACATAGATGTCAGAAAGTA
TCGAATCATGAGGACACTGAAGATGCAGGGGATTCAGAAAAGCAGTCTCAAGCTCCGAAA
CCGACTTCTCTACAGCAAAGAATGTTGATGCTGTCGGGACAGAACATAGACGACTTCATG
AAAGAGATGGAAGAAGTGCATCGCAAGAGAGAGAGAGACAGAGCTGCGGATTTGAGTGCC
AGACTGACTGCCCTGAAACGTTCCGGTGGAAACCGTGACAGTGATTCTGACAGCGACAAC
GAGACCCACGGTCATCACCACCACCACGACTTCACGCCTGAACCACCGGGGGCTGAACTA
CGACAGATACCGCCGCTCATACCACCAGGGCTCCGCCCTCCGATGCTTCGTCCGCCGGGA
GTTCCCCCTGGGGCGCCGCCCGGCCCCCCTCCCGGATCACACCCTGCACCACATTCTGGA
GGTCTGATGCTGCCCCCGGGTCCCCCGCCGGGTCTGCCTCGCGCCGCCCTCCGTCCGCCG
GGCCCGCCGCCGGGTGCTCCGCCCCGATTGAGGCCACCTCACGCTCCTCTTACAACCCAC
GGCCCCCTCGCGCCGCATGTTTCAGTGCTCTCCGCTGCGCCACAGCTCATCACCAAGAAA
GACGCCGTTCAAGGTGCGACGATCAGTGCGAAGCCTCAGATAAGGAATTTATCGGCGGAC
GTGACCCGCTTCGTTCCGTCGGCTTTGCGCGTTAAGAGAGATGATAAGAAATGTAAGCCG
GACATCAGGTCGACCTTACACCGCCCGCCGGAGACGAGGCAGCCGAGCAAGGACGACGCC
TACATGCAGTTCATGAAGGAAATGGAGGGATTGTTATAG
Protein sequence:
MGRRSINTTKSGKYMNPTDQARKEARKKELKKNKRQRQMVRAAVLKMKDPTQILEELQKI
DEMEYNVLQPSPLNEKVLKEKRKKLKETFDRVLKMYDKDDPEKWVELKKQEMEYETRRAH
LISYYESVKHAQSVQVDDIPLPTLQVPDNLIYGNVPSQIPLPIDSIHPNLPVRPILKKDS
VYRERPSGVEPPGVPPGPPPDLESLLGLESNKKDKHKEKKSIRFSDLPDEPPGEHRCQKV
SNHEDTEDAGDSEKQSQAPKPTSLQQRMLMLSGQNIDDFMKEMEEVHRKRERDRAADLSA
RLTALKRSGGNRDSDSDSDNETHGHHHHHDFTPEPPGAELRQIPPLIPPGLRPPMLRPPG
VPPGAPPGPPPGSHPAPHSGGLMLPPGPPPGLPRAALRPPGPPPGAPPRLRPPHAPLTTH
GPLAPHVSVLSAAPQLITKKDAVQGATISAKPQIRNLSADVTRFVPSALRVKRDDKKCKP
DIRSTLHRPPETRQPSKDDAYMQFMKEMEGLL