| New model in OGS2.0 | DPOGS210396 |
|---|---|
| Genomic Position | scaffold1295:- 16122-18740 |
| See gene structure | |
| CDS Length | 2109 |
| Paired RNAseq reads | 1058 |
| Single RNAseq reads | 2530 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008282 (0.0) |
| Best Drosophila hit | CG7372 (3e-07) |
| Best Human hit | zinc finger protein 836 (7e-09) |
| Best NR hit (blastp) | PREDICTED: similar to ZNF91L [Monodelphis domestica] (2e-24) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_275668 [Branchiostoma floridae] (4e-24) |
| GeneOntology terms | GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0008270 zinc ion binding GO:0005622 intracellular GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL40252 |
Nucleotide sequence:
ATGGAGGATGAGACTATCATTACGAACACTGATACATTGTACCCGGTACTGCTTATACCA
AAAAAATGCACCACATTGGAGACGAATTGCGAGGCTGCGGACAATGTGTTCATAGATTTA
AACATAACCTCCCCCGACACTGAAGGTAATGAAACCTGTATTTATTCGGGGTTCTGCAAC
GTTAAACTTATAGATAGCTATGACGTTAACATCAACGAGGGAGATTCCAACAGTCAATCC
TCGGATTCCAAGGACGATCACCAAATTCCTGTGATAGTGAGCGAGGCCAGTCAGGATCCG
ACATTCAATCAGTCCCAAGTATGGATAGATCCGGCCAGGAGCCCGTATGTTTACAACAGC
TACGACGCAGTGGAGTCCCAAGAACATTACTCAGTGTACAGCCAGACCCTCGCCAGCCAC
ATCACAGTCGAGCAACACAATACGTACATAACACAGAATGTATACAACTACAAAGAACAA
GTACCGTATTCGCCGATCGAGGAATTCGGTCACAAGAAATTCAGAAAGAATCATGGGAAT
GAGATAAATCATGATTTGTACGAGGATGACGAGTTTGAATGCGGCGTCCTGCTGTCTCAG
TTGCCCGAGGAAATCATGAATGAGAAAGAGAATAAAGCGAGAGAGGAATTGATGTACATT
AATCTTCAGAGTGAAAATGATGCTCTGAAGCAATTGATGTCTTCAGATATACAGTCTCTG
TCGAAACAACAGAAGACCATAATGTACCTGGGTCATGATTCGCATTACGGCCAAACTGTT
CAGAAAATTGCAGTCAACGATCCCTCCTTGGAGTGCAATGGTGTTGGTAATGAAGTCATT
GTAGAAAGTACTCAACCTAATCATAAAAAGTATCAATGTGATAAATGCAAGCAATTTTTT
GATCAAATAACAACTTTCAAACAGCACATGGTCGGTAACCATAAGAGTCCAAAGGAGTTA
TTCAGACCCAACCCCATTAGAGAAATGAAATTCATGTGTACCGAATGTGGCAAACATCTG
AAGAATCAGAAGAAATTTGAACTGCACTGTCTCGGTCATGGTAACCCTGAGTTAGAGTGC
AACAAATGCCACAAAGTGTTCGCTTCAAAATTCACTCTAAGAAATCATTTAAAAATACAC
CAGAGAAAATTTCCTTCAACAAAGTATCCGGATCTGGAGGAACACAAACAAACACACGCC
AGTGAAGTAGATTTGAGTGATTCCGACTTCACTCTATCACTCAACGGTGACATCATCAGC
GACAGCGGCAGTCTATCACCATCCACCGAAGATTACATTATAAGATCCGAAGACTTCGAT
CAGAAATTGGATGAAATTAAAAAAGCCGATTCGGTGATCGCTAAGGTGATGTCGAACAAA
ATGTTTCTGCTTCACACCAAGAAGGCTCGACGAGATAAAAAATATAAAAAAACTTGCGAC
GTGTGTTTAAAGACCTTCGATCGTATCGGCGACCTCAAAAGGCATCTCATAGAGCACGTA
ATTAGAAGCACCCTGGCAAAAACTCCAGTCAACAAAAACGGTACACTGACAATACAATGT
GAGGTCTGTCAGGTCGAGAATTTCACTAAAATCGACAAATACAAAGCTCATTTACGCGAA
CACGCGAAACTCACCTTATATAAATGCACATTTTGTGACAAATCCTTCAGCGACTCCAGC
AACTTTTCGAAGCACAAGAAAATTCACGGCACAACATTCTTCCAATGCGATCTCTGTCAA
AGGAAATTCAACTCCAAGAAGATGATCGCACAACACATGGAATATCACAATAACAATTCT
CCAATCCCTTGCCCGTACTGCGATAAAGAGTTTCATTTTCCCTCGATGTTGAATAAACAC
GTAAAATGTGTTCACAATCGAGAAATGTCCAGATTTAGGTGTAGATTTTGTCATGAATAT
TTTAAAACACTTAAAGATAAATGGGATCATGAATGGAGAATACATAACGTTAGGAAGATT
ATCGTGGACTGTTTGATTTGCGGTTCGAAGTTTCGAAAGTATTCAGAGTTAAAAAGGCAT
TGCACGGACGTTCACGGTTTAGATATACCTCCCGCCAAAAAGTTGCTGCGTAAACGGAGA
TTATTGTAG
Protein sequence:
MEDETIITNTDTLYPVLLIPKKCTTLETNCEAADNVFIDLNITSPDTEGNETCIYSGFCN
VKLIDSYDVNINEGDSNSQSSDSKDDHQIPVIVSEASQDPTFNQSQVWIDPARSPYVYNS
YDAVESQEHYSVYSQTLASHITVEQHNTYITQNVYNYKEQVPYSPIEEFGHKKFRKNHGN
EINHDLYEDDEFECGVLLSQLPEEIMNEKENKAREELMYINLQSENDALKQLMSSDIQSL
SKQQKTIMYLGHDSHYGQTVQKIAVNDPSLECNGVGNEVIVESTQPNHKKYQCDKCKQFF
DQITTFKQHMVGNHKSPKELFRPNPIREMKFMCTECGKHLKNQKKFELHCLGHGNPELEC
NKCHKVFASKFTLRNHLKIHQRKFPSTKYPDLEEHKQTHASEVDLSDSDFTLSLNGDIIS
DSGSLSPSTEDYIIRSEDFDQKLDEIKKADSVIAKVMSNKMFLLHTKKARRDKKYKKTCD
VCLKTFDRIGDLKRHLIEHVIRSTLAKTPVNKNGTLTIQCEVCQVENFTKIDKYKAHLRE
HAKLTLYKCTFCDKSFSDSSNFSKHKKIHGTTFFQCDLCQRKFNSKKMIAQHMEYHNNNS
PIPCPYCDKEFHFPSMLNKHVKCVHNREMSRFRCRFCHEYFKTLKDKWDHEWRIHNVRKI
IVDCLICGSKFRKYSELKRHCTDVHGLDIPPAKKLLRKRRLL