New model in OGS2.0 | DPOGS208423  |
---|---|
Genomic Position | scaffold480:+ 46736-49270 |
See gene structure | |
CDS Length | 2535 |
Paired RNAseq reads   | 960 |
Single RNAseq reads   | 2928 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009425 (0.0) |
Best Drosophila hit   | brain tumor, isoform C (1e-166) |
Best Human hit | tripartite motif-containing protein 3 (5e-34) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP010054-PA [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP010054-PA [Tribolium castaneum] (0.0) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR011042 Six-bladed beta-propeller, TolB-like IPR001841 Zinc finger, RING-type IPR000315 Zinc finger, B-box IPR013017 NHL repeat, subgroup IPR017907 Zinc finger, RING-type, conserved site IPR003649 B-box, C-terminal IPR001258 NHL repeat IPR018957 Zinc finger, C3HC4 RING-type |
Orthology group | MCL16133 |
Nucleotide sequence:
ATGGCCTCACGCACCCCGTCCCTTGAGTCGCTGCCTGGTGCCAACTCTATAGGTTCCTTG
GAGCGTGGCTCCTTATCGCCCCTGACTTTGAGCGGATCCTCGCCCCCTGCGAGCGATTCC
GCCGTATGTGATCTTCGTGAGTTCGACGGCCTCGACACCACCTGCGCTATCTGCCGAGAG
ACATTCGTCGACCCCAAAGTACTCAATTGCTTCCACACTTTTTGCCGCGGGTGCCTAGAG
CGGGAACAAACTCATCCCGAGAAAGTCACTTGCGTCACGTGTCGTGTAGACAGCCAGCTG
CCACCAGCGGGTGTGCCTGGCCTGTTAACGAACCTTGTAATCGCCGCCGCAGTCGAGCAG
GACGCTGATCTTTTGCCAACTGCACGTCAGACAGCCTCGCCCTCAGCTCGCTGCACCGGC
TGCAAATCAAAAGAATCTGACGCTGTTGCGCGCTGCGTAGATTGTGCCAACTTCCTTTGT
CCTAATTGCGTCATGGCACACCAATTCATGCATTGTTTCGAAGGCCATAGGGTTCTTGCC
TTCACAGACCTGAAAGACGATAAAGGCATGCTAGGCTCACTCACCCCAAGCGGGGACAAG
ACTGCTTTTTGCCCAAGACATAAAAATGATATACTGAAGTATTTCTGCCGTACTTGCTCA
GTGCCAGTGTGCAAAGAATGTACCATTATCGAACATCCAGCAACTTTACATGACTGCGAG
CATCTCTCTGACGCTGGACCTAAACAGCTAGAACTTATGCAGCAAGCAGTCAACGAAGCT
AAATCTCGTGCTACCGAAATAAGGCACGTTGTAAAAACGGTAGAACACGCAGCGGGAAAA
TTACAAGTCCAATATCACAAAGCTCAAAATGAAATCAATGACACTTTTCAATTCTATCGC
TCTATGCTAGAAGAGCGGAAGCAGGAGTTGCTTAAAGAACTCGAAAGTGTTTTCTCAACT
AAACAAATTGCTTTGACTGTTGTCGGACAAAAAGCTCAAGAAACTGTTGAGAAAATTTAT
CAAACCTGCGATTTCGTGGAGCGATTGACAAAGTGTGCAAACATCGCTGAAATTCTAATG
TTTAGAAAACTGTTAGATACTAAATTGCAATCTTTAATGAGCACTAATCCAGAACAGAGC
GTGCAGACTGCTTGCGAACTAGAATTTGTATCTAATTATCAAGCGATACAAGTCGGTGTA
AGGAACACCTTTGGGTACGTTCGTTCAAGCTCGGAAGCTAATGTTGGTCCCACTAAACAA
CCTCCTATCGCGCGTCCAACAAATGGATCCCTGTTGAACGGAGGTTCTTCATCAAGCAGC
AGCAGTGTAAATGGAAGTTCCGGTAGCCTCAATGGAGGAATTCATTTACCTACAGGATTA
AATGGCGTCCTAGATCGCCCTTACACCAACGGACTACTCGGACCGACAAGTCAGTCAACT
TCACCGTTTGATTCAAACATTATTTCAAAAAGATTCAACAGTCCTAACACTTTGGGGCCG
TTCTCTACTGCCATCGGAGAAATTAATTTGAACGGAATAAATCCATATGAAAAATGGTCT
AACGGCGGTTGCGACACATTGTTTCCTCCAACCACTACTGATCCTTACTCATTAACAGCG
GCTGCGCACAATGACCCTATTCTTGATTTAACTAATAAGTTGATATCCACTGCCATTTTT
CCACCAAAGTCTCAAATTAAACGACAAAAAATGATTTATCACTGTAAATTCGGCGAGTTT
GGTGTAATGGAGGGTCAATTTACCGAACCCAGTGGTGTTGCAGTTAACGCTCAAAACGAC
ATAATCGTTGCTGATACAAATAACCATAGAATTCAAATATTTGACAAGGAAGGAAGGTTT
AAATTCCAATTCGGTGAATGCGGTAAGCGTGATGGACAACTTCTGTATCCAAATAGAGTG
GCAGTAGTGAGAACTTCAGGTGACATAATTGTAACTGAAAGATCACCAACACACCAAATA
CAGATTTACAACCAGTATGGTCAATTCGTTAGGAAATTTGGAGCCAATATTCTTCAACAT
CCTCGCGGCGTAACAGTTGACAACAAAGGAAGGATTGTTGTCGTAGAGTGCAAAGTGATG
CGCGTCATCATCTTCGACCAAGTTGGCAACGTGTTACAAAAGTTTGGTTGTTCAAAACAT
CTAGAATTCCCCAACGGTGTTGTAGTCAACGACAAACAGGAAATATTTATTAGTGACAAC
CGCGCGCATTGCGTCAAGGTCTTTAATTACGAAGGTATTTATCTGCGTCAAATCGGTGGC
GAGGGAGTGACAAATTACCCTATCGGCGTTGGCATCAACGCGTCTGGAGAAATACTGATT
GCTGATAACCATAACAACTTCAATTTGACGATATTCACCCAGGATGGTCAGCTGGTGTCC
GCCTTAGAAAGCAAAGTTAAACATGCCCAGTGCTTCGACGTCGCTTTAATGGACGACGGA
TCAGTCGTGCTCGCCAGCAAAGATTACCGGCTTTACATCTACCGCTACGTGCAAGTTCCG
CCTATAGGTATGTGA
Protein sequence:
MASRTPSLESLPGANSIGSLERGSLSPLTLSGSSPPASDSAVCDLREFDGLDTTCAICRE
TFVDPKVLNCFHTFCRGCLEREQTHPEKVTCVTCRVDSQLPPAGVPGLLTNLVIAAAVEQ
DADLLPTARQTASPSARCTGCKSKESDAVARCVDCANFLCPNCVMAHQFMHCFEGHRVLA
FTDLKDDKGMLGSLTPSGDKTAFCPRHKNDILKYFCRTCSVPVCKECTIIEHPATLHDCE
HLSDAGPKQLELMQQAVNEAKSRATEIRHVVKTVEHAAGKLQVQYHKAQNEINDTFQFYR
SMLEERKQELLKELESVFSTKQIALTVVGQKAQETVEKIYQTCDFVERLTKCANIAEILM
FRKLLDTKLQSLMSTNPEQSVQTACELEFVSNYQAIQVGVRNTFGYVRSSSEANVGPTKQ
PPIARPTNGSLLNGGSSSSSSSVNGSSGSLNGGIHLPTGLNGVLDRPYTNGLLGPTSQST
SPFDSNIISKRFNSPNTLGPFSTAIGEINLNGINPYEKWSNGGCDTLFPPTTTDPYSLTA
AAHNDPILDLTNKLISTAIFPPKSQIKRQKMIYHCKFGEFGVMEGQFTEPSGVAVNAQND
IIVADTNNHRIQIFDKEGRFKFQFGECGKRDGQLLYPNRVAVVRTSGDIIVTERSPTHQI
QIYNQYGQFVRKFGANILQHPRGVTVDNKGRIVVVECKVMRVIIFDQVGNVLQKFGCSKH
LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGIYLRQIGGEGVTNYPIGVGINASGEILI
ADNHNNFNLTIFTQDGQLVSALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQVP
PIGM