New model in OGS2.0 | DPOGS209522  |
---|---|
Genomic Position | scaffold1435:+ 380-4255 |
See gene structure | |
CDS Length | 1206 |
Paired RNAseq reads   | 973 |
Single RNAseq reads   | 2723 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007330 (1e-47) |
Best Drosophila hit   | stripe, isoform A (5e-11) |
Best Human hit | early growth response protein 1 (1e-11) |
Best NR hit (blastp)   | PREDICTED: similar to bric-a-brac [Acyrthosiphon pisum] (2e-11) |
Best NR hit (blastx)   | C2H2 transcription factor (AmdA), putative [Aspergillus fumigatus A1163] (6e-12) |
GeneOntology terms    | GO:0003682 chromatin binding GO:0033081 regulation of T cell differentiation in the thymus GO:0048596 embryonic camera-type eye morphogenesis GO:0043565 sequence-specific DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0007417 central nervous system development GO:0030857 negative regulation of epithelial cell differentiation GO:0048704 embryonic skeletal system morphogenesis GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0007389 pattern specification process GO:0008285 negative regulation of cell proliferation GO:0017015 regulation of transforming growth factor beta receptor signaling pathway GO:0046872 metal ion binding GO:0005622 intracellular GO:0008134 transcription factor binding GO:0051216 cartilage development GO:0016481 negative regulation of transcription GO:0048598 embryonic morphogenesis GO:0010464 regulation of mesenchymal cell proliferation GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent GO:0005634 nucleus GO:0005667 transcription factor complex GO:0051150 regulation of smooth muscle cell differentiation |
InterPro families    | IPR020478 AT hook-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR017956 AT hook, DNA-binding motif |
Orthology group | MCL40151 |
Nucleotide sequence:
ATGAAGTCGGGTGGCATCAAAGTGGTTCAGCTGGCCGTGCTGCAGAAACAGAACCAGACC
AACAACGAGCACGACGACTCTGACGACAAGGCGGGCAAGCTAGTGATGGACGACGATGAG
GAGACGGATTCCAGCGGGTCCATATCAGACTCGGCGGCGAACGAGTCGCAGGACGGGCGG
CCGCACGTCTGTGATATATGTGACGTCAGGTTCGCTCGGTCGTCTCATCTCTCCCGCCAT
CGCCTCACACACACCGGCGAGAGACCCTTCACATGCGGAGGATGCGGGCGCTCCTTCGCG
CGCTCCGACAAACTGAGGGTGCACACTAAAATATGCGAACGGGAGGATCCGACAGTGGAC
ATGGCCAATGAATCAGTGAAACGTGAGAACAACTCGGAAGTGATGTCAGGGATGGTGCGC
ACCACTCACCGGGAGTCAGGACACCTGGTGTTCACGCCCAGTGGGGACGTCATGCTGCCT
CCGCGGCCCGGCAACCCTGTAGTACTCAATTCGACCCTGGAACCCGTGAGGAACGAACTC
AATGCCTCGGACTTAGTGGACCCGCCGCGCAGGGGCCGCGGCAGGCCGAGGAAGACCCCC
CTGCCCCTCACGCCCAAGATCAAGAAGAGGAGGGGACGACCGCCCAAGACATCACTCGAT
ATGGAAGGCTGTGTTCTGACAGGCGGGTCGGTCTCCGGCAGCGCGCTGGCCGGACATCAG
CTCATGCTGAAAAGGAAGCGAGGACGCCCGCCAAAGAACTACTTCCTGTCACAGCCGGGT
ATGGATATGGCAATCCAGTACAGCATTGCGGCAGAAATGAACAACATTTACGGACGACCC
AACGAGAACTACAACGCGACCAACCTGCCGTTCGGGGACTTCTCCTACCTGACCGAGATG
ATGTACAACCCGCTGGCGTACCCCTACGTCACCGTGGACCCCGACCGGAACGTGGACGCC
GACGCCGCCGACACGTCGCGCGGCACCATCGACGTGTCCGACACCAGCTCCGACGACGAC
TCCGAGGCCGACCGCCGCCGCGTCATGACGGTGGGCGACTGCCAGATAGTGAAGCTGCCG
CCGGCCGACGAGCGCGAGGAGCGCGACGACTCCCCGCCCGACGAAATCCCGCCCCCCACC
AGCTCGGTCACCATCACGCCCATCACCACCGTCGGCGACTGCACGCTCCGGCCTCACAAC
GCATAA
Protein sequence:
MKSGGIKVVQLAVLQKQNQTNNEHDDSDDKAGKLVMDDDEETDSSGSISDSAANESQDGR
PHVCDICDVRFARSSHLSRHRLTHTGERPFTCGGCGRSFARSDKLRVHTKICEREDPTVD
MANESVKRENNSEVMSGMVRTTHRESGHLVFTPSGDVMLPPRPGNPVVLNSTLEPVRNEL
NASDLVDPPRRGRGRPRKTPLPLTPKIKKRRGRPPKTSLDMEGCVLTGGSVSGSALAGHQ
LMLKRKRGRPPKNYFLSQPGMDMAIQYSIAAEMNNIYGRPNENYNATNLPFGDFSYLTEM
MYNPLAYPYVTVDPDRNVDADAADTSRGTIDVSDTSSDDDSEADRRRVMTVGDCQIVKLP
PADEREERDDSPPDEIPPPTSSVTITPITTVGDCTLRPHNA