New model in OGS2.0 | DPOGS213569  |
---|---|
Genomic Position | scaffold484:- 66898-73148 |
See gene structure | |
CDS Length | 1470 |
Paired RNAseq reads   | 1923 |
Single RNAseq reads   | 4633 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011641 (1e-96) |
Best Drosophila hit   | CG3529 (3e-89) |
Best Human hit | TOM1-like protein 2 isoform 3 (4e-85) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC003525 [Tribolium castaneum] (2e-132) |
Best NR hit (blastx)   | PREDICTED: similar to CG3529-PB [Apis mellifera] (2e-115) |
GeneOntology terms    | GO:0006886 intracellular protein transport GO:0005622 intracellular |
InterPro families    | IPR008942 ENTH/VHS IPR002014 VHS IPR004152 GAT IPR014645 Target of Myb protein 1 IPR018205 VHS subgroup |
Orthology group | MCL12771 |
Nucleotide sequence:
ATGTCGTTTTTTGGAGTAGGGAACCCATTTGCTACGCCGGTTGGTCAGAAGATAGAACAA
GCTACCGATGGATCTCTACCATCAGAGAATTGGGCCCTTAATATGGAGATATGCGATATA
ATAAATAGTAGCACTGACGGACCCAAGGATGCAATTAAGGCCATAAGAAAGAGGTTGACT
CAAAGTGCAGGCAAAAACTACACCGTGGTCATGTATACACTAACTGTATTGGAAACCTGT
GTTAAAAATTGCAGCAAAACATTTCATGTTCTAGTATGCAATAAGGAGTTTATATCAGAA
CTGGTCAAACTCATTGGACCCAAAAATGATCCACCGACTGTGGTACAGGAGAAGGTTCTC
AGCCTCATTCAATGTTGGGCGGATGCTTTCCAAAACCAACCTGAATTACAGGGCGTTGGT
CAAGTGTATAATGAATTGCGCAACAAAGGTGTCGAGTTTCCAATGACAGACCTAGATGCC
ATGGCGCCAATTTTCACACCGCAGAGGAGTGTGATTGACGGCGGGGAGCCGGTAGTTGGT
TCTCCACAACGTACTATTCAGCAGAACTCTCCAAGTCGACCATCTCAGGAGCAAGTCGTA
GGGACAATTCTGTCAGACAGTCAGAGCAGTAAGCTGCGGGCGGACCTGTCAGTGGTTGAG
GGGAACATGACAGTCATGAACGACATGCTGACCGAACTCACAAGCCTTCCATACACACAG
CATCACGAACAAGACATCGAACTGCTGAATGAGCTAGCAGACACCCTGAAGGCGATGCAG
ACTCGTGTCGCTGAGCTGGTGGGTCGTTTAGGGGAATCCCCGCTGACGGCCGACCTTCTG
CTGACCAATGACCGCCTCCACAACCTGTTACTGAGACACTCCAGGTTCATCAATAACAGA
ATTGCCGCGACTGGTGGGGCGACGCCATCCGCCATTTTGGGCGCCGCCATGGGTGTGCCG
GGCGCCACTTCACCTGAGAAAAAAGATGACGACGCTTTAATTGATCTCAGTGATGACGTA
CCCGATGTTGCTAAACTATCTGTTAAAGACGATACAATCGATAAATCACCAAGCAGTTCC
AAGGATGAGTTCGATATGTTTGCTCAGTCTAGGAACGTTACCTATGAGACCACTAAGACG
GGCGGCAGTAGCTATGCTGATAATGCTGAAGCTCCCGTCGGAGGTCTAGGAACCGCTATG
AGGGCTCATAACACACTGCCGACAGGAATGGATCAAAGGGAATTTGATGAAATATCGGCT
TGGTTGGCCCAAGAGAAGGCAGCGACTGAAGCTAACGGACAGGAGAGTGTGACGAGCAGC
GATTTTGACAAGTTCCTCGCCGAGAGGGCCGCGGCCGCAGACAGCCTGCCGAATGCTGGC
CAGGGACAAGGTCAGGGTCAGGGTCAGGGTCAAGCGACGCCCCGCCACCGCCACATCAAG
AAGGACGAGGACTCCATGTTCGCGCTATGA
Protein sequence:
MSFFGVGNPFATPVGQKIEQATDGSLPSENWALNMEICDIINSSTDGPKDAIKAIRKRLT
QSAGKNYTVVMYTLTVLETCVKNCSKTFHVLVCNKEFISELVKLIGPKNDPPTVVQEKVL
SLIQCWADAFQNQPELQGVGQVYNELRNKGVEFPMTDLDAMAPIFTPQRSVIDGGEPVVG
SPQRTIQQNSPSRPSQEQVVGTILSDSQSSKLRADLSVVEGNMTVMNDMLTELTSLPYTQ
HHEQDIELLNELADTLKAMQTRVAELVGRLGESPLTADLLLTNDRLHNLLLRHSRFINNR
IAATGGATPSAILGAAMGVPGATSPEKKDDDALIDLSDDVPDVAKLSVKDDTIDKSPSSS
KDEFDMFAQSRNVTYETTKTGGSSYADNAEAPVGGLGTAMRAHNTLPTGMDQREFDEISA
WLAQEKAATEANGQESVTSSDFDKFLAERAAAADSLPNAGQGQGQGQGQGQATPRHRHIK
KDEDSMFAL