| New model in OGS2.0 | DPOGS200923 |
|---|---|
| Genomic Position | scaffold2438:- 21280-24053 |
| See gene structure | |
| CDS Length | 600 |
| Paired RNAseq reads | 96 |
| Single RNAseq reads | 383 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000398 (1e-99) |
| Best Drosophila hit | CG1140, isoform A (3e-76) |
| Best Human hit | succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial precursor (2e-77) |
| Best NR hit (blastp) | succinyl-CoA:3-ketoacid-coenzyme A transferase 1, putative [Pediculus humanus corporis] (4e-89) |
| Best NR hit (blastx) | succinyl-CoA:3-ketoacid-coenzyme A transferase 1, putative [Pediculus humanus corporis] (9e-88) |
| GeneOntology terms | GO:0046952 ketone body catabolic process GO:0008152 metabolic process GO:0008410 CoA-transferase activity GO:0005739 mitochondrion GO:0016740 transferase activity |
| InterPro families | IPR004165 Coenzyme A transferase IPR004164 Coenzyme A transferase active site IPR012791 3-oxoacid CoA-transferase, subunit B |
| Orthology group | MCL11229 |
Nucleotide sequence:
ATGCCAATGCTGGCCAGCAACTATATCCCAAAGAATGTTAAAGTTTTATTACAATCTGAG
AATGGGATACTTGGCCTTGGTCCATTCCCAACTGAAGATGAAGTAGACCCTGATTTAATT
AATGCTGGCAAGGAAACTGTCACTGTTCTACCTGGTGCTTCATACTTTTCATCAGATGAT
AGTTTTGCTATGATCCGTGGTGGTCACATAGATCTCACAGTCCTGGGTGCTATGCAGGTC
TCGAGATACGGCGACCTTGCTAATTGGATGATACCTGGTAAAATGGTGAAAGGTATGGGA
GGCGCAATGGATCTGGTATCAGCGCCTCGCACCAAGGTTGTTGTGACAATGGAACATGCG
GCCAAGAACGGCTCACACAAAATATTACCAGAATGCACTTTACCACTCACCGGCAAGAAC
TGTGTGGATATGATCATTACTGAAAAGTGTGTCTTCGATGTCGACAAGGAAAAAGGTTTG
ATTTTGACGGAACTGGCTGAAGGCGTCACCATAGAGGATGTTATCGTAAGCACGGGCTGT
GAATTCAATGTATCTGATAATATCAAGATAATGGGTGACGTCACAAAAGTCACCGAATAA
Protein sequence:
MPMLASNYIPKNVKVLLQSENGILGLGPFPTEDEVDPDLINAGKETVTVLPGASYFSSDD
SFAMIRGGHIDLTVLGAMQVSRYGDLANWMIPGKMVKGMGGAMDLVSAPRTKVVVTMEHA
AKNGSHKILPECTLPLTGKNCVDMIITEKCVFDVDKEKGLILTELAEGVTIEDVIVSTGC
EFNVSDNIKIMGDVTKVTE