| New model in OGS2.0 | DPOGS200924 |
|---|---|
| Genomic Position | scaffold2438:- 18186-20885 |
| See gene structure | |
| CDS Length | 1080 |
| Paired RNAseq reads | 99 |
| Single RNAseq reads | 262 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | tetraspanin 33B (1e-06) |
| Best Human hit | ND |
| Best NR hit (blastp) | peripherin 2b (retinal degeneration, slow) [Danio rerio] (8e-08) |
| Best NR hit (blastx) | Photoreceptor outer segment membrane glycoprotein, putative [Pediculus humanus corporis] (6e-08) |
| GeneOntology terms | GO:0016021 integral to membrane |
| InterPro families | IPR008952 Tetraspanin, EC2 domain IPR018499 Tetraspanin |
| Orthology group | MCL20451 |
Nucleotide sequence:
ATGAGCACTCAAACTCCAAATCGTCCGTACATCGTGTGGGCGTCGTGGGTGCTTTGGTCC
ATATCAATATTTTTTATAATATGGTCGCTGCTCTTATTTTTCTATATCAGTGACATGTTA
GTTTTAACAGGCACTGACTTAGTGAACGCCGTGGTTCTACTCTCGGGTATACTCATGGTA
CCTACGAATGTCTATATCGTCTATTCTATAGCGACTGGCCAAAAAATTGTGTTTGCAGGG
AAAGTTATATGTTGTCGTTTATGGACATGTATTGTGTGGATCATTATTATAAATCTCATT
GGAGTCGTTTTATGTATACGAAGAATTTACGTCTGTCAACTCATTATCCACAACAGCCTT
TACACCAGTATGCAGAATTATAAAACAGTGCCAAAATGCAAACACTTCATTGACCATATC
CAATGGGGGTTAGGTTGTTGTGGACTCAATTCTTATACTGATTGGTTTACTCATGAATGG
CACGACAGAGACCGTGACTTTGAGTGGAGTTCTGTAAGCGAGAGTAGTGAAACGATTACA
TCACGTAGAGAGATTGACAGTGTGCCATATAGCTGTTGTAAGAGCGGATCCTGTGTTTCA
AATTACTTGAAAGAGCTCGGGACTTATTCGATAAATACTAATGGGTGTGCATATTCCGTG
TACCGTATTGTTCTAATATCCTTGAACGCACACCTTATTTTGTTCGTCACTGTCGTTGTT
CTAGAAGCGTTTCTGTTGAGGATTTTAATGTTAGAGAAGAATGAGCCAGACGATACCAGA
GACGCCTCTAGAGGAAATATAAACAATATCATGAATGTTAATGATAACTTTGAAATATCA
AGCGGATCCTACCAATTGTATGAAGATGACAGCGATGAGGTGGAAACTTCAAGACAGAAC
AAAAGAGAGGCAAGAGACTCCAACTTCAGACCTTGGCGCCCCCCCGAATTTGTCGCCCTG
GGCCATCGCCCCATCACGCCCCCCCCTAACGCCGGCACTGCATTTCTCAGACCCTATCGT
GACGACGCGTGTATTGACTGCTATCCTGGAGTACCCTACATCTTACAAGCAAATACTTAG
Protein sequence:
MSTQTPNRPYIVWASWVLWSISIFFIIWSLLLFFYISDMLVLTGTDLVNAVVLLSGILMV
PTNVYIVYSIATGQKIVFAGKVICCRLWTCIVWIIIINLIGVVLCIRRIYVCQLIIHNSL
YTSMQNYKTVPKCKHFIDHIQWGLGCCGLNSYTDWFTHEWHDRDRDFEWSSVSESSETIT
SRREIDSVPYSCCKSGSCVSNYLKELGTYSINTNGCAYSVYRIVLISLNAHLILFVTVVV
LEAFLLRILMLEKNEPDDTRDASRGNINNIMNVNDNFEISSGSYQLYEDDSDEVETSRQN
KREARDSNFRPWRPPEFVALGHRPITPPPNAGTAFLRPYRDDACIDCYPGVPYILQANT