| New model in OGS2.0 | DPOGS209686 |
|---|---|
| Genomic Position | scaffold27:+ 102060-104718 |
| See gene structure | |
| CDS Length | 819 |
| Paired RNAseq reads | 14676 |
| Single RNAseq reads | 92053 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000526 (4e-34) |
| Best Drosophila hit | ypsilon schachtel (1e-28) |
| Best Human hit | nuclease-sensitive element-binding protein 1 (3e-26) |
| Best NR hit (blastp) | Y-box protein [Bombyx mori] (4e-68) |
| Best NR hit (blastx) | Y-box protein [Bombyx mori] (4e-37) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003676 nucleic acid binding GO:0003677 DNA binding |
| InterPro families | IPR002059 Cold-shock protein, DNA-binding IPR012340 Nucleic acid-binding, OB-fold IPR019844 Cold-shock conserved site IPR011129 Cold shock protein IPR016027 Nucleic acid-binding, OB-fold-like |
| Orthology group | MCL39445 |
Nucleotide sequence:
ATGGCTGATACCGAAAAGGCGCCGCAGCCGCAGCCCCAGCAGCAGCAGCAGCAGCAACCT
GAACAACAACCCCAACCTCAACAAGTTAAACAAAAAAAGCAGGTTATTGCTGAAAAAGTT
TCGGGCACTGTAAAATGGTTTAACGTCAAGAGTGGATATGGCTTCATCAACAGAAACGAC
ACCAAGGAGGATGTGTTTGTACACCAGACAGCTATCGCCCGTAATAACCCACGTAAGGCT
GTGCGCTCGGTTGGCGACGGCGAGGCGGTGGAGTTCGCCGTTGTGGCCGGCGAGAAAGGC
TATGAAGCAGCCGGAGTGACCGGCCCCGGCGGCGAGCCGGGGAAGGGCTCGCCCTACGCT
GCTGACAAACGTCGGGGCTTCCCACGCCAGTTCTACATTCCTCGGCCTGGAGGCGGACGT
GGCGGCGAGGGGGCTCCACGAAGAGGTGGCATGGGACGTCGCGGGCCCCCGCCCACACAG
GGGGGCGCGCAAGGAGATGAGGGCCAAGAAGTTGCTGGAGGCCCACCGCAACGCAGCTAC
TTCCGTCGTAACTTCCGTGGCGGAAGACGTGGCGGTGGCGGTCCCCGTCCGATGTACCGT
GGCGGGTACAGGTATGTGCGCCCGCGCAACAACCAGCCGGGCCAGAACCAGAACCAAGGT
CCAGTTCAAAACCAGGGACAACCGGCCCTGAGACAGAATGGCCAGGAGGGAGAGGCTCAA
GCATCTGCTTCCACGGCACCGGCTCAGCCCAAGGCCAAGCCCAACAACAAGCCCACGGGC
ACCACAATTGAAACCACCACCAATGAAAGCCAGGCCTAA
Protein sequence:
MADTEKAPQPQPQQQQQQQPEQQPQPQQVKQKKQVIAEKVSGTVKWFNVKSGYGFINRND
TKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGYEAAGVTGPGGEPGKGSPYA
ADKRRGFPRQFYIPRPGGGRGGEGAPRRGGMGRRGPPPTQGGAQGDEGQEVAGGPPQRSY
FRRNFRGGRRGGGGPRPMYRGGYRYVRPRNNQPGQNQNQGPVQNQGQPALRQNGQEGEAQ
ASASTAPAQPKAKPNNKPTGTTIETTTNESQA