| New model in OGS2.0 | DPOGS209688 |
|---|---|
| Genomic Position | scaffold27:+ 135257-150992 |
| See gene structure | |
| CDS Length | 5598 |
| Paired RNAseq reads | 10663 |
| Single RNAseq reads | 26951 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000528 (2e-37) |
| Best Drosophila hit | eukaryotic translation initiation factor 4G, isoform B (2e-52) |
| Best Human hit | eukaryotic translation initiation factor 4 gamma 1 isoform 1 (2e-58) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013876 [Tribolium castaneum] (3e-167) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013876 [Tribolium castaneum] (5e-152) |
| GeneOntology terms | GO:0005515 protein binding GO:0005737 cytoplasm GO:0005829 cytosol GO:0006446 regulation of translational initiation GO:0008190 eukaryotic initiation factor 4E binding GO:0016070 RNA metabolic process GO:0016281 eukaryotic translation initiation factor 4F complex |
| InterPro families | IPR016021 MIF4-like, type 1/2/3 IPR003307 eIF4-gamma/eIF5/eIF2-epsilon IPR003891 Initiation factor eIF-4 gamma, MA3 IPR003890 MIF4G-like, type 3 IPR016024 Armadillo-type fold |
| Orthology group | MCL11283 |
Nucleotide sequence:
ATGGTCGCTCTGAGAGGTGGTAACAGTTCATTGAGCACTGTGACGCACGGCTGCGGGATT
CACGGTGGACAACAAAATGCCCTGGATTTGACACATCGTTTACAAACATCGCTTGGAATG
CAACTCGGGACTGCGTCGCATGCGGTTGGCCATCACACTAGCCATTTAAATCACGCCAGC
CATGGCAATCACTCGAACCACGGCAGCCATACGAACCACGGCCACGGAAACCAGTTGAAC
ATACCATCGCTGAGTAACGTGTCGGTGCTGATGCCGCAACAGAATGCAGCCTCGCTCAAG
CACGAGCAGAATACGCGCTATTCTAGTTCCAACTGCATGCTGCAATCGCACCACTACAGA
CGGTTGACGCAATCTATAAATTTCCTTAGCATTATTTTCAGTTATCCTCGGGCGTCAACA
CCACACATGTTATTAGATCATTACAACAACATAACGCAAGTGCCCGCTTCAGGACCGGAA
TGTTACCATCCGTCGACGGGTAACGGAGCATATATGTCCACCCAGACTCAAAACATGCGA
GGTCAGCCCTCACAGCCGTCAGCACCGCCGGCGCCTCAGCAGGACATGTCCAAGACAACC
ATGGCTGGTTCCACGTACGTGTCACCTCAAACCCAAACTCCGCCGTCGCGGCCCCAGTAT
CCAAACTTCCCCTACAGAGCTTCCCAACACGCCAACAGGCCTAATTCGCACCCTAGACAA
CAACAGCAGTACATGGGAAGCGCGGGTGCAACAACGGCTGGTCCCGTTATGTATCACCAT
GCCTTAGTGTTCCCTCCAACACACATGGGCATCCCACAAAGCTACCCGCAGCCGCGCTCC
AGTACACCTGGGTACTATCAATATGTGGCGCCTTATATAAGTTATACCACACCCGCCGGT
CACACTCCACCCTATTATTATCCAACCAACGGGCAGCAGTTGGCGGCGGGCAGTGTCGGT
GGTAACGGTGGTCGTACTAACCCTGGCTCGTTGGTACCGCCGCAGGGCGCCGCGCCGGCT
GCTCCCTCGCTGCAGCACCCACAGCAGCAACCCCTCTTACACGCCACCATTCCCGGTATA
CGTACGGTCCCTCCAAAACGTACATCCCATAGACTTGCAATTATTAATCCCTTAACGAAA
CAAGATATATTTTCGGAACAATGTAATAATGATAGCCAATTTATTAGTGGTGATTCAAGT
GATCGGCAAACTCCTCAACCAGAACAGCAACCAACACATAGTGCCGCCGAGGAGTTTCTA
AGAATGGTTAATGAAGTAGCGAATCAGCCATCAGCTAGTGAAAGTGCTAGTAAATCGAAC
TTTGTTTCTAAGAATGTCGAAGTGCCTGCCACAAACGCAAGCTCCAATCAACCTCATACA
AACGCAATAAGTACTATTAATAGTAATAATATAAAGTCTGAAATATTAATTGTTAATGAA
AGTAAAAATGTAGGATCTGAAATTATAGAGTCCAACGAAACGCCGGTTGTATCGGCAATA
TCGGATAGTCCCGTTGTAGTGCCTAAAATGACTGTGAATACTAAACAACTCCAAAAGAAT
AGTGAACAGAATCTGCCTTTAACCATAGATAATAGTAAGATTATACCGAATAGTAAGCCA
CAAAAACAAAACAAGATCAAACCAGTTGTGCCTCAAGATGAAATAGAAAAGCAATCAGAA
ATAGTGAATTCTATAGTTCCTCAAAGCGTTCAAGGTATTATTATACAAGCGCCTTCTGAA
GCGGTTAATTCCGTTTCTCCTCCGAGCGACACTCCGGTGTCGCCGGCGGTGCCTGCACCA
GTGCCAGAAGTAGCGCAATCAGTGCCGGTGCCGGTGCCGGTGCCGTCAATGGGGTCAGCT
CTCTCTTCTCTGACGCCTGCACCACCACAGCCACAGAGAATAAGAGAGCCCCGAGATCGA
AACAGATCAGAAGATAAAGAAAAACAGACAACTAAATCTAAGGAGCAAGATAAAGATACA
TCCAAAGCAAACGGTCCTGTTTCGGTTGAGATTAGTTCAGTTGATAGTATACGAAATACT
ATCAAACCTCTAACTAGTCAAGTAAATCAAAACCTGGAAGCAGATATACCAAAAAAGCAA
CCAGAATTAGAGACTGAGAAAACAAGCGATAAGAAACCTGAGGTTGTGATTAACAGAGAG
CCTACATTCCCCGTCAAACCTACCCCCACTGCCACTGAATTGTTGTCTGCTAGTATTGAA
AAGGTTGCCAAAGAGCAACCACAAGTAGTGCCTGAAGTGTCACCTAAAAAAGAAGAATCC
ATTACAATCCAAGCCCAAGCCAAACTAACTCAAAGTATAGCAAGTGCTGCACGGAATCAA
ACTGAATCTAAAATGAAAGATATTAATCTGAATAATAAAACAGATCCTGATACTGCTAAT
GGAAATTCCACTGAAGCTACTAAGATGGAAGCAGTGAAAGATGAAGGAAACAAAAATGAA
AAAGCTGTAAAGAATTCTAAAAATAATAACAAAAAGTCTAATAAAAATTCAAATTCTGAA
GTTGCTCCAAAAGAAACAGAAGCATATGAAAATGGTAAAGAAGAGATTGAAAAAATTACA
AGCAAACAAGAGAAAGTTGTAACTCCGGAAGAAGAATCAACTGAAATGGCTGAAAACTCT
GCACCAACTGCAGTTCCAGAAGCTCCAACACCTGCACCAGTTTCAGCACCTGCACCAGCT
GTTTTTGTTCCTAAATATAAATACTCTGATGATCAATGGTCTCCCCTAAACAAGTCTGGT
AAAAAGACTTATGACATAGGTTTACTTATGCAAATAAAAGATGATCCTCTATGCAAGAAC
AAACCCAATGCTCCCTTGTTAGAGGCATGCAATGTGATGCGGACTGCGCCAATTCAAGAG
CCAATGTCATTTAATGCAATTTCAAGACCAATGAACGATGCAGTGTTATTCCCCAACTTC
CTTAAGAATTCTAGTGTTGGTAACAGAAACAACGCTCCGAGGGAACACAAAAAAGATGGC
CGAAACTTGCCTCAGAGTGGTAAGAGCAGCGTTAAATTGACACCATCAGGTAGTGGAAGC
AGTGGTCACAAACCTGTTATACATGTGTCACTCTCGCTGCGTGAGGAGGTGAAGCTTAAC
CAAACTAAGGATGCCTGGAGACCTACAAGGTTCAAGAAAGAAAATCTTTCTGAGGAGGAG
GCCAAGACACAGGACCTATACAAGAAGTTCCGTGGTATTCTTAACAAACTCACTCCACAA
AAATTCGATACATTGCTGGACAGAGTCAAGTCCCTTGAAATCAATACACAAGCTCGTCTC
GAAGGTGTTATTGATTTGGTTTTCGAAAAAGCCATTGATGAACCGAATTTCTCTGAAGCT
TATGCTGCTATGTGCAGTAAACTTTCCATGTTAAAGGTACCTTCCAACAATGCTCCTGAG
CAATGTGTCAACTTCCGAGCACTGATTGTCACAAGATGTCAGAACCAATTTGTTACGGAT
AAAGTGGATGAACAAGTACTCAAAATAGAGAAAGAGATCAGTGAATGCACTGACCCTACC
AAGAAAAAAGAATTGCAACTTCAACTTGAAGAAGAAAACAGGCGTGTCAGAATGAGATCA
GTGGGAAATGTCAGATTTATAGGTGAACTGTATAAACTAAAAATGCTTACATCCAAGATT
ATGGTCTACTGCATGACTTACTTAATTGACAAACTGGAAGAAGAGAAATTGGAATGTCTT
TGCAAACTCCTCACTACCATTGGTGAACAAGTAGAAAGTGAAGTAAAAGAGCAACTAGAA
AGTGTCTTCAAGAAGATGCAGGATATTGTTGATCGTAAATCAAATAAAATAAGCAGCAGA
GTGCGATTTATGATTCAAGATGTGATTGAGCTTAGAAAACGAAGATGGTTTGCTAAGAAT
GTTGTAGACTTGCAGCCCAAGATGATGGATCAGATTCAGAAGGAAGCCGAACAGCAACAA
CGGCATATTGAGTTAATGAACGCTGCTCCAATGGGCGGTGGATTCCGTCGTGAGGACGGA
GGCCGCAATAAACGTGGCGGTCGTCAAGGCTCCAATTCATTCCTGGATAACCAGTGGAAA
GCCTCAACCAACTACAATCGCACCAACTACACTGTTGATACCTCTAAATTTAAGGCGGTA
ACACAAAAGAATCTTACTGATATTAAACTGGCTCCACATAACTCTGCTTGGAACCATGGA
TCTGGAACAAAGAATACAGCTCAAGCTAGTAGTAACTCTATGATTAGTCTGTCCAAAAAT
ATGTACAGCATGCTTGAAAATGTGCAAGCAGATCCTACATCACTCAGAACAAAAGATCTC
TCTCCTGGTTATCAACATTCAAAGTCCATCGAGCGATCAACCTTCAATTCCAGAGGAAAT
GGCAGTAACAGTCGTTCCGGATCAGTTGGAGTCACAAGATCTAACTCTAGCAGCCGAGGC
CCGGCCACGCCTGCGCCGCCACAAGAGAATACACCAGCAGCTCCTGTCCCACAGGAACCT
CTACCCGAAGCTAAAAAGAAGGCATTCAAAATGCTCATCATGGACAGATTTGTCAATCCC
AACGACGATGATTTGGTGTCGGAGATCAAACAAACCGTCGCGCCGCAGTATCACGCCGCT
TTGGTCACGGAGACCCTGAATATTGCACTAGAAAAATCAGCAAAGGAGATTCAGATTATT
TCTAAAACACTACTCCATTTGGTTTCGACTGGATTTATATCAGCTGAGAACTTCGTGACT
GGAATCAGCGAGATTATGGAATTCGCATCCGATCTTTACATTGATATACCGATGTTATAC
GAGTACTTAGGGAAGATTATAGTACCACAAATTGAAAAGAAGCATATCACATTTGTACAA
ACATTTAGATTATCTGAAAACATAATACAATCCAAGCACGGCCACTTGTTCTTAAAAGCA
ATAATAAAAGACTTAAAGGATAGCATGGGACCTTCTTTCGTAAAAACGAAATGGCAAGAA
TCTGGTCTTGAACTGAAGCAATGGATGAGTGAAGATCAGATACCAAAATGGCTAGAAGAT
AATAAATTTGAATTCTTGGAGGGTGGTAAGTCCAGTGAAGAGACGAAAAAGATTCTTACG
CCACAAGAAACGCAAAGCAAATTACTACAGCTCATAAATAACGACGAGAACTGTGATTGC
ATACGAGGATGGGTTCAGGATAATCTGGGTGCGTCAGCTAATGAAGACTGGTTTATGCGT
GCTTTAATACAACCAATTTGCGAGTACGCATTATACGGAACTGAAGGACGTGATGTACCG
CACTTTAGCCATGAACGTATGAATAAATACGTTCCGCTCATAAGCGAGTTCGGTGAATCG
CGTGATCAACGTGAACTTTACTGTTTATTCGGAATACAGCAATTTATACATAGACTGGAA
CACCCTCAAGGGCTAACTTTAGATATATTCCAATATTTACACGAACAATATATAATATCT
GTAGAAGGGTTTATTGCATGGGAAGAATCTGAGATGGAGCCGGAAGGCAAGGCGGTGATG
CTTAAGGCACTCACGTCATTCTTCACTAATATTAAGGAGGCGGAGGCCGACAACGAGGAA
TCTGGTAGCGAGGAATGA
Protein sequence:
MVALRGGNSSLSTVTHGCGIHGGQQNALDLTHRLQTSLGMQLGTASHAVGHHTSHLNHAS
HGNHSNHGSHTNHGHGNQLNIPSLSNVSVLMPQQNAASLKHEQNTRYSSSNCMLQSHHYR
RLTQSINFLSIIFSYPRASTPHMLLDHYNNITQVPASGPECYHPSTGNGAYMSTQTQNMR
GQPSQPSAPPAPQQDMSKTTMAGSTYVSPQTQTPPSRPQYPNFPYRASQHANRPNSHPRQ
QQQYMGSAGATTAGPVMYHHALVFPPTHMGIPQSYPQPRSSTPGYYQYVAPYISYTTPAG
HTPPYYYPTNGQQLAAGSVGGNGGRTNPGSLVPPQGAAPAAPSLQHPQQQPLLHATIPGI
RTVPPKRTSHRLAIINPLTKQDIFSEQCNNDSQFISGDSSDRQTPQPEQQPTHSAAEEFL
RMVNEVANQPSASESASKSNFVSKNVEVPATNASSNQPHTNAISTINSNNIKSEILIVNE
SKNVGSEIIESNETPVVSAISDSPVVVPKMTVNTKQLQKNSEQNLPLTIDNSKIIPNSKP
QKQNKIKPVVPQDEIEKQSEIVNSIVPQSVQGIIIQAPSEAVNSVSPPSDTPVSPAVPAP
VPEVAQSVPVPVPVPSMGSALSSLTPAPPQPQRIREPRDRNRSEDKEKQTTKSKEQDKDT
SKANGPVSVEISSVDSIRNTIKPLTSQVNQNLEADIPKKQPELETEKTSDKKPEVVINRE
PTFPVKPTPTATELLSASIEKVAKEQPQVVPEVSPKKEESITIQAQAKLTQSIASAARNQ
TESKMKDINLNNKTDPDTANGNSTEATKMEAVKDEGNKNEKAVKNSKNNNKKSNKNSNSE
VAPKETEAYENGKEEIEKITSKQEKVVTPEEESTEMAENSAPTAVPEAPTPAPVSAPAPA
VFVPKYKYSDDQWSPLNKSGKKTYDIGLLMQIKDDPLCKNKPNAPLLEACNVMRTAPIQE
PMSFNAISRPMNDAVLFPNFLKNSSVGNRNNAPREHKKDGRNLPQSGKSSVKLTPSGSGS
SGHKPVIHVSLSLREEVKLNQTKDAWRPTRFKKENLSEEEAKTQDLYKKFRGILNKLTPQ
KFDTLLDRVKSLEINTQARLEGVIDLVFEKAIDEPNFSEAYAAMCSKLSMLKVPSNNAPE
QCVNFRALIVTRCQNQFVTDKVDEQVLKIEKEISECTDPTKKKELQLQLEEENRRVRMRS
VGNVRFIGELYKLKMLTSKIMVYCMTYLIDKLEEEKLECLCKLLTTIGEQVESEVKEQLE
SVFKKMQDIVDRKSNKISSRVRFMIQDVIELRKRRWFAKNVVDLQPKMMDQIQKEAEQQQ
RHIELMNAAPMGGGFRREDGGRNKRGGRQGSNSFLDNQWKASTNYNRTNYTVDTSKFKAV
TQKNLTDIKLAPHNSAWNHGSGTKNTAQASSNSMISLSKNMYSMLENVQADPTSLRTKDL
SPGYQHSKSIERSTFNSRGNGSNSRSGSVGVTRSNSSSRGPATPAPPQENTPAAPVPQEP
LPEAKKKAFKMLIMDRFVNPNDDDLVSEIKQTVAPQYHAALVTETLNIALEKSAKEIQII
SKTLLHLVSTGFISAENFVTGISEIMEFASDLYIDIPMLYEYLGKIIVPQIEKKHITFVQ
TFRLSENIIQSKHGHLFLKAIIKDLKDSMGPSFVKTKWQESGLELKQWMSEDQIPKWLED
NKFEFLEGGKSSEETKKILTPQETQSKLLQLINNDENCDCIRGWVQDNLGASANEDWFMR
ALIQPICEYALYGTEGRDVPHFSHERMNKYVPLISEFGESRDQRELYCLFGIQQFIHRLE
HPQGLTLDIFQYLHEQYIISVEGFIAWEESEMEPEGKAVMLKALTSFFTNIKEAEADNEE
SGSEE