New model in OGS2.0 | DPOGS213729  |
---|---|
Genomic Position | scaffold2582:+ 23963-28613 |
See gene structure | |
CDS Length | 1998 |
Paired RNAseq reads   | 245 |
Single RNAseq reads   | 618 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011527 (0.0) |
Best Drosophila hit   | CG3822 (6e-114) |
Best Human hit | glutamate receptor, ionotropic kainate 3 precursor (8e-91) |
Best NR hit (blastp)   | AGAP002797-PA [Anopheles gambiae str. PEST] (3e-141) |
Best NR hit (blastx)   | ionotropic glutamate receptor subunit ia [Aedes aegypti] (3e-136) |
GeneOntology terms    | GO:0015277 kainate selective glutamate receptor activity GO:0006811 ion transport GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity GO:0005234 extracellular-glutamate-gated ion channel activity |
InterPro families    | IPR001320 Ionotropic glutamate receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001828 Extracellular ligand-binding receptor IPR001638 Extracellular solute-binding protein, family 3 |
Orthology group | MCL40647 |
Nucleotide sequence:
ATGTTTTTGAGAGTTTTCGTCTTGGTGACGGTGGTGATAAAATGTGTCGCAACACAACAG
CCGGTTATTGGGGGTTTATTTTACAGCGATGACGAGGATCTACAAATGGCGCTCACTGTG
AGCGCTAAAATGTCCAACTTCACCACATCAATACGCACTGTGTCTAAAAGGGGAGAGATG
ATTGAAATATCTAATCATATCTGTTCCCTTGTCGAAGAAGGCATATTTGCCATTATTGAA
GGTCTTGGAGGAAAAGCGACAGAACTAGTTCAATCTCTTTGCGATATTCTGGAGATACCT
CTCATTGTTTTGGAAGATAATGACTATTTCGCGAGAACCTGGTCCCTAGTGAATCTGTTT
CCGAGCCCCGTTGCTTTCAACATGGCTCTGGAAAATTTGATTTTAATGAAGAATTGGCGA
AACTTTACTATTCTTTACGTCAAAGGCCACAGTCTAACTAAAGTGCATAGTTTAATGAAA
ATGGGTTATCCTACTGACAAATTTACTGTTACTATCAGAGAACTAAATGGCACAGATTAT
AGAGACACTTTAATAAGTTGTAGAAAAAGCGGCCAAGTTAATTTCGTTGTGGACTGTCCA
TCAGCAAACTTGGAACAAATTCTGCAGCAAGCCCAACAAGTTGGTCTAATGGCAGACGAA
CATTCATACATATTTGTGTCCCCGGATTTATTCACTATCAATTTAGACCGTTACCGATAT
GGCGGAGTCAATATGACTGGTTTTAGACTCATTGATTTGTCAAAAAATGAGTTTCTATGG
GATTACGTGACGAATTACAACACGGAGTCAGGTTTTAATGTCGAACCATATGAACTTAAG
GCTAAATCTATTCTCATCCGTGATGCGATCCTTGTGATCTCTGACGCCTTGTCGAAACTC
AACCAGAACAACTTATTTCCGAAACTTGAATCGCAAAGTCTCAGCTGCGAAAACTACGAG
TCTTGGCAGTTTGGGTCCACCTTGATCAACTTTATGAAGACGAATAAAATAGAAGGTGTC
ACGAGAACTTTAATATTTGATGGATTCGGACAAAGGAACGATGTTATTATGGACATATTA
GAGCTAACGCCGGCTGGAAATCAAACAATTGGTAATTGGAGTAGTGAGGGGCTTATTCTC
GACAGACCGTTTGTGCCGGCAGCTGAAATAGTCGAGGAAACGATAATGAGAAATAAAACA
TTCAAAGTTCTTATATCTACGACAGCTCCTTACGGTTACATTAAGAACTCAGATAAACGA
TTGGAGGGTAATGACAGATACGAAGGGTTCACAATAGATTTAATAGAAAAACTCTCTGAA
ATGTTGGGTTTCAACTATGAATTTGAAATTGAATCTGACTACGGGACCATAGATTCTGTT
ACACATAAGTGGACAGGGATGGTGCCGAAACTTAGAGAAGAGAAAGCCGATTTCGCGATT
TGTGATTTTACAATCACAGCGGAGAGACAGAACGAAATTGACTTCTCAACCCCTTTTATG
ACTCTCGGCATTGGTATACTTTATAAAGAACCAAGTAAACAACCGCCCGAAATGTTTTCC
TTTATGGCTGTATTTTCTAAAGAGGTCTGGTACTATATGATGCTGGTTCAGGCTGGGCTT
GGAGTTATCATGATATTCGTGGGCCGCATTTCTCACAAGGAGTGGCAGAACCCGGTACCG
TGTATAGAACAACCAGAGGAATTGAGCAACCAGTTCAGTTTTTCTAACTCGGTGTGGCTT
ATCATTGGATCGGTTATGCAACAAGGCACAGAAATCGCACCCATTGCTCTAGCACCTCGA
ATAATAACAAGTGTGTGGTGGTTTTTTACGATGGTCATGGTAGCTTCTTACGTGGGAACC
TTGGTAGCCTTCCTCACTGTGGAGAAGAATGTTCTTCCTTTCACTACAGTTGAGGAATTA
CATGCCCACAAATCAATATCATACGGATGTAAAAGCAAAGGTTCTACAAAACAATTCTTT
CAGGTGAATGACATCTAA
Protein sequence:
MFLRVFVLVTVVIKCVATQQPVIGGLFYSDDEDLQMALTVSAKMSNFTTSIRTVSKRGEM
IEISNHICSLVEEGIFAIIEGLGGKATELVQSLCDILEIPLIVLEDNDYFARTWSLVNLF
PSPVAFNMALENLILMKNWRNFTILYVKGHSLTKVHSLMKMGYPTDKFTVTIRELNGTDY
RDTLISCRKSGQVNFVVDCPSANLEQILQQAQQVGLMADEHSYIFVSPDLFTINLDRYRY
GGVNMTGFRLIDLSKNEFLWDYVTNYNTESGFNVEPYELKAKSILIRDAILVISDALSKL
NQNNLFPKLESQSLSCENYESWQFGSTLINFMKTNKIEGVTRTLIFDGFGQRNDVIMDIL
ELTPAGNQTIGNWSSEGLILDRPFVPAAEIVEETIMRNKTFKVLISTTAPYGYIKNSDKR
LEGNDRYEGFTIDLIEKLSEMLGFNYEFEIESDYGTIDSVTHKWTGMVPKLREEKADFAI
CDFTITAERQNEIDFSTPFMTLGIGILYKEPSKQPPEMFSFMAVFSKEVWYYMMLVQAGL
GVIMIFVGRISHKEWQNPVPCIEQPEELSNQFSFSNSVWLIIGSVMQQGTEIAPIALAPR
IITSVWWFFTMVMVASYVGTLVAFLTVEKNVLPFTTVEELHAHKSISYGCKSKGSTKQFF
QVNDI