| Genomic Position | scaffold633:+ 9047-20131 |
|---|---|
| See gene structure | |
| CDS Length | 1614 |
| Paired RNAseq reads | 28 |
| Single RNAseq reads | 90 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007365 (1e-22) |
| Best Drosophila hit | mediator complex subunit 20 (1e-15) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 20 (4e-07) |
| Best NR hit (blastp) | GK16399 [Drosophila willistoni] (5e-14) |
| Best NR hit (blastx) | GK16399 [Drosophila willistoni] (4e-13) |
| GeneOntology terms | GO:0016455 RNA polymerase II transcription mediator activity GO:0006367 transcription initiation from RNA polymerase II promoter GO:0016592 mediator complex GO:0003713 transcription coactivator activity GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0006350 transcription GO:0003899 DNA-directed RNA polymerase activity GO:0005634 nucleus |
| InterPro families | IPR001254 Peptidase S1/S6, chymotrypsin/Hap IPR009003 Peptidase cysteine/serine, trypsin-like |
| Orthology group | MCL21862 |
Nucleotide sequence:
ATGGGTGTAACGGTTTTACAGCAATATCCGGTTCCTGAAAATAAAACCGGTACCTATGTT
ATAGATTTACTGACAAAAAGAATTTTAGCTCTGGGTGCTACACAGGCAGGACAATTCCTA
GTCGACTGTGAAAGTTACTTATCACATCCGACTATGGATGGAGCCGATGGTGAAGATCGA
TCTGTGACAACGGTGGCTTTAATTCAAGCTGAATTCGTGATCGCACCGGCAGCTGACATC
GGACCAATACCAAAACATGATTTCAGAAAGAACTCCCGCATACTGCTTGGCCAGGACTGG
GGTCCAAGTAATTACAGGGTCCGGAATTACGTCATACATCCAGAGTATGAGGATACTTAT
AACACCATAGCTTTAATACAACTCAGTACACCGGTTAGGAGCGAAACTTTGAAGCCGCTG
TGTCCACCTCCACTAAGGTTAAGGAATCCAGAGTTCTATGTCGTCAAGTTCAAAGATGGC
GACGATTATAATGTGCTGCAAAAACAAGTATTTCCAGTGACTCACATCCAATCGACTTTG
TGTCGGGATTTTTACGTTCGGTCCAATCTGTACGCGAAAAGGATGCGACCACCGCACGTG
GCGTGTGCTGTTTCTTTAGAGGACAGTGTCTGCGTGTGGAATGCTGGGTCCGCTTTAGTG
ACACGTGACATATGGGGCAGATGGCTCTTGCTTGGCGTCGGAGTTCGTGGACCAGGTTGT
GGCGCTCCGTCCCGGTATTTGGACATGATGAGCTACTACCCCTGGATAGAAGACAGCCTT
AACAAGTTCAAGAGAATCAGCATTTCAAAGATATCCAAACAGAAATATGTGCTTAGAGGA
GATACAGAGGAACCTGCGCTGAATACAGCGTACCAGAGATTCGGAAACTGCGATCCTGAA
GAAAAAATCAATTTGATATTCCGAGAATTCATTTACCTACGCACCGACAACAATCAATAT
CAGTTTTTGACGTACAATCTATCCATATATGAAAATGTGGAGTTTTCGTGTCTGACTCTG
GAACTGGTGAACGCATCAGCTGTGTCCGAGATACGGATCAAGCACGTGTGTCCCAGAGAA
GTTAGAGGACCGCCTTGTTACCGATACAAAGGTTATATACCATATTTGAGTCCTCCTGGA
TCCGTGTTCGAAATATCACTATACATAATGTTCTCGGAGTCCGCGCGTTTTGAAATGTAC
GCCTGGGGTTGGAAGAAAAACATGACGCTGATAGATTTTCATGAATGGAAGCTGGAAGAG
GGTACTTTTTACGAAGATTTTTCGTTACAACTAGTTGAATATAGGGGTCCGACTCATGAG
ACCGAGTTTGGCTTTGAGCCTATAGACATTGCTATGTGGGTCCCAGAATACGACGTGTGG
TCCAGCAGTGAGCCTCCTGATCCCAATGTAACCACAACAAAGCTCATTAAGAGAGGAGAA
GACGAAATGCCCGAGCAAGAGGTCACTGTTAAAGGAATTGAAATTATGGTACTCCCTACA
GATGGTTTGCAACCAGATATAAAACTCATAGCTAAAATGACAGGAATACCAAACCCAATG
CCAAGATATCAGAAGCCAACAAAGTCTAGACTGACTACCCTTGAAAGTAGTTAA
Protein sequence:
MGVTVLQQYPVPENKTGTYVIDLLTKRILALGATQAGQFLVDCESYLSHPTMDGADGEDR
SVTTVALIQAEFVIAPAADIGPIPKHDFRKNSRILLGQDWGPSNYRVRNYVIHPEYEDTY
NTIALIQLSTPVRSETLKPLCPPPLRLRNPEFYVVKFKDGDDYNVLQKQVFPVTHIQSTL
CRDFYVRSNLYAKRMRPPHVACAVSLEDSVCVWNAGSALVTRDIWGRWLLLGVGVRGPGC
GAPSRYLDMMSYYPWIEDSLNKFKRISISKISKQKYVLRGDTEEPALNTAYQRFGNCDPE
EKINLIFREFIYLRTDNNQYQFLTYNLSIYENVEFSCLTLELVNASAVSEIRIKHVCPRE
VRGPPCYRYKGYIPYLSPPGSVFEISLYIMFSESARFEMYAWGWKKNMTLIDFHEWKLEE
GTFYEDFSLQLVEYRGPTHETEFGFEPIDIAMWVPEYDVWSSSEPPDPNVTTTKLIKRGE
DEMPEQEVTVKGIEIMVLPTDGLQPDIKLIAKMTGIPNPMPRYQKPTKSRLTTLESS