DPGLEAN01327 in OGS1.0

New model in OGS2.0DPOGS203534 
Genomic Positionscaffold2436:- 5856-8209
See gene structure
CDS Length861
Paired RNAseq reads  969
Single RNAseq reads  2416
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA009181 (1e-99)
Best Drosophila hit  CG5602 (7e-95)
Best Human hitDNA ligase 1 (2e-80)
Best NR hit (blastp)  GK15713 [Drosophila willistoni] (3e-106)
Best NR hit (blastx)  PREDICTED: similar to AGAP009222-PA [Acyrthosiphon pisum] (2e-98)
GeneOntology terms




  
GO:0003910 DNA ligase (ATP) activity
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0003677 DNA binding
GO:0006310 DNA recombination
GO:0005524 ATP binding
InterPro families


  
IPR012340 Nucleic acid-binding, OB-fold
IPR012310 DNA ligase, ATP-dependent, central
IPR016027 Nucleic acid-binding, OB-fold-like
IPR012309 DNA ligase, ATP-dependent, C-terminal
Orthology groupMCL12634

Nucleotide sequence:

ATGAGATCAAAGGAGGTGTTATCGACTCGCAAACGGAAGGACGCGTCCGAGGACCAGATC
AAGGTGCAGGTGTGTGTGTTCGTGTTCGACCTGCTGTACCTCAACGGAGAGGCGCTCGTC
AGGGAAGACCTGGAGAAAAGGAGGGAGCTGTTGAGGCAGCACTTCAATGAGGTCGAAGGT
GAATGGCAGTTCGCGGTGAGCCGTGACTGTACCGACGAGGAGGAGGTGGCTCAGTTCCTG
CAGGAGTCTGTGAAGGCATCCTGTGAGGGTCTCATGGTGAAGGCGCTCCGGGGAGAGAAT
GCGCGCTATGACATAGCCAGGAGGTCGCACAACTGGCTGAAGTTAAAGAAGGACTATCTG
GAGGGCGTGGGCGACTCCGTGGACGCGGTGGTGATCGGCGCTTATCACGGGCGGGGGAAG
AGGACGGGCGTGTACGGCGGGTTCCTGCTGGCGTGCTACGACCCCGCTCACGAACAGTAC
CAGTCGCTCTGCAAGATAGGCACCGGCTTCTCCGACGAGGACCTGCGCACGCTCAGCGAC
ACGCTCGCCGAACACGTCGTAGACGGACCCAGGAGCTACTACTTGTTCGACTCGAGCCAC
TCCCCGGACGTGTGGTTCTCTCCGTCGTGTGTGTGGGAGGTGCGCTGTGCGGACCTGTCC
CTGTCCCCGGCTCACCGCGCCGCTCTGGGCCTCGTACATGACAGTAAAGGAATCAGTCTG
CGGTTCCCGAGGTTCATCCGTGTCCGTGACGACAAGTCCGCGGAGCTGGCGACCTCCGCG
GAACAGATCGCAGAGCTCTACCTCCGGCAGGACCAGGTCAAGAACACCACCAACAACAAC
CAGAGAGACGACTTCTACTGA

Protein sequence:

MRSKEVLSTRKRKDASEDQIKVQVCVFVFDLLYLNGEALVREDLEKRRELLRQHFNEVEG
EWQFAVSRDCTDEEEVAQFLQESVKASCEGLMVKALRGENARYDIARRSHNWLKLKKDYL
EGVGDSVDAVVIGAYHGRGKRTGVYGGFLLACYDPAHEQYQSLCKIGTGFSDEDLRTLSD
TLAEHVVDGPRSYYLFDSSHSPDVWFSPSCVWEVRCADLSLSPAHRAALGLVHDSKGISL
RFPRFIRVRDDKSAELATSAEQIAELYLRQDQVKNTTNNNQRDDFY