| New model in OGS2.0 | DPOGS205353 |
|---|---|
| Genomic Position | scaffold1782:+ 17592-19277 |
| See gene structure | |
| CDS Length | 1686 |
| Paired RNAseq reads | 541 |
| Single RNAseq reads | 1529 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007297 (2e-55) |
| Best Drosophila hit | mystery 45A (2e-104) |
| Best Human hit | protein SDA1 homolog (9e-90) |
| Best NR hit (blastp) | PREDICTED: similar to Protein SDA1 homolog (Mystery protein 45A) [Tribolium castaneum] (2e-175) |
| Best NR hit (blastx) | PREDICTED: similar to Protein SDA1 homolog (Mystery protein 45A) [Tribolium castaneum] (2e-108) |
| GeneOntology terms | GO:0005488 binding GO:0005730 nucleolus GO:0042254 ribosome biogenesis |
| InterPro families | IPR016024 Armadillo-type fold IPR007949 SDA1 |
| Orthology group | MCL14770 |
Nucleotide sequence:
ATGTTACGAGATTCAAACACTAAAACTGCAAAGCTGGCGATCGACATTTTGATTGAATTG
TATCATAAAAACATTTGGAACGACCACAAAACTGTTAACATAATTGCTGATGTGGGATGT
TTCTCTAAAGTCACCAAAGTAATGGTTGCTTCTTTGAAATTCTTTCTAAGCAGGGAAGAG
GAAGAAAAATCTGATTCTGACAGTGACGATGAAGTAGACCCTCGGGATACCATGATTGCA
AATAAGTTTAACAAGAAAACTAGAAAGAGAGAGAAAATGGTTGAAAAAGTTAAGAAAACA
GCGAAAAAATTAAAAAAGAAGAAAGAAAAAGCTCCTATATTTAATTTCTCAGCTCTACAT
TTGATCAACAATGCTCAAGGATTTGCAGAAAAACTCTTTAAGCAAATAGAATCATCAAAT
GAGAGATTTGAAGTAAAACTTATGACGTTGGATGTCATATCTCGGCTAATTGGCTTACAT
CAATTGTTTTTATTCAATTACTATCCGTTCATTGCTCGTCTGCTTATGCCACATCAAAGA
GAAGTCACTCGGATCCTACAATTTGCAGCACAGGCCGCACATGAACTAGTTCCACCTGAA
GTCATTGAACCAGTCATGAAAGCTATAGCCAATAACTTCATCACAGAAAGAAATTCCACC
GATGTAATGGCTGTTGGGCTAAATGCCGTTCGAGAAATTTGTGCCCGCTGCCCGTTAGCA
GTGAGCGAAGATTTATTAAGAGATTTAGTTCAATACAAATCATACAAAGAGAAATCTGTT
ATGATGGCTGCCAGATCACTTATACAATTATATCGTCAAACTATGCCTAATATTTTACAT
AAAAAAGATAGAGGCCGACCTTCTGAGGCATCAGTAGAATTAAAAGATAAAAAGTATGGT
GAAATTGATATAAAAGATTATATACCTGGGTCAGAAGTTTTACTTGAAAAGGAAGAAATA
AAAGAAAAGAAGAAGATCCAGAAGAAATCTAAGAGCAAAGATGATTCCGATGATGAATGG
GTTGATGTTGGTTCTTCAGATTCAGAAATTAATATCTCTGATAGTGATGAAGATGATGAA
GATGAGGAAGATGAACAATTAGCTGAGGAAAGTGATGAGGCAGCTGAAAGTGATGAAGAT
GGTGACAAAAATGAATCAAATGAAACAGTAGAAGAAACTAACACATCTGCAACTGAAAAA
GAAAAACCTAGAAAAATACTAAAAGCCAAAAGAACTATCACCAAACAAGAAAGAGACGAA
AAGATCAAAGTGGCCCGTGAACTGGCTGCGGAAAAAATATTCACTGATGAAGATTTTAAG
CGTATTGAAGCTGCGCAAATCAAGAAAATGGTTAGTGGCGTGAAACGTAAGTCAAATATA
ATCGAAGAAGAAGATGAATCCCCTGAATTAGTTCAGCTTTCTGCCATCGAAAATATACAC
AAAAAGAGGAAGCATGATAAAAGTGCAAGACTTGAAACTGTACTCAAAGGAAGGGAGGAG
AGAGCTAAGTTTGGTTACAAAGATCGAAGGAAAGATGAGAACTGTTCAAAGACCAACAGG
GAAAAGAGAAAAACAAAATCCTATCAAATGGTGAAGCACAAAGCAAGAGGCAAAGTTAAA
CGGTCATTCAAAGAAAAACAAATAGCTTTTAGAAATTATCTTATAAAACAAAAGAAAATG
AAATAA
Protein sequence:
MLRDSNTKTAKLAIDILIELYHKNIWNDHKTVNIIADVGCFSKVTKVMVASLKFFLSREE
EEKSDSDSDDEVDPRDTMIANKFNKKTRKREKMVEKVKKTAKKLKKKKEKAPIFNFSALH
LINNAQGFAEKLFKQIESSNERFEVKLMTLDVISRLIGLHQLFLFNYYPFIARLLMPHQR
EVTRILQFAAQAAHELVPPEVIEPVMKAIANNFITERNSTDVMAVGLNAVREICARCPLA
VSEDLLRDLVQYKSYKEKSVMMAARSLIQLYRQTMPNILHKKDRGRPSEASVELKDKKYG
EIDIKDYIPGSEVLLEKEEIKEKKKIQKKSKSKDDSDDEWVDVGSSDSEINISDSDEDDE
DEEDEQLAEESDEAAESDEDGDKNESNETVEETNTSATEKEKPRKILKAKRTITKQERDE
KIKVARELAAEKIFTDEDFKRIEAAQIKKMVSGVKRKSNIIEEEDESPELVQLSAIENIH
KKRKHDKSARLETVLKGREERAKFGYKDRRKDENCSKTNREKRKTKSYQMVKHKARGKVK
RSFKEKQIAFRNYLIKQKKMK