| New model in OGS2.0 | DPOGS203555 |
|---|---|
| Genomic Position | scaffold2529:- 23167-28087 |
| See gene structure | |
| CDS Length | 1203 |
| Paired RNAseq reads | 11972 |
| Single RNAseq reads | 30731 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004251 (2e-115) |
| Best Drosophila hit | ornithine decarboxylase 1 (2e-85) |
| Best Human hit | ornithine decarboxylase (5e-85) |
| Best NR hit (blastp) | ornithine decarboxylase [Spodoptera litura] (2e-139) |
| Best NR hit (blastx) | ornithine decarboxylase [Spodoptera litura] (2e-136) |
| GeneOntology terms | GO:0004586 ornithine decarboxylase activity GO:0042462 eye photoreceptor cell development GO:0003824 catalytic activity GO:0006596 polyamine biosynthetic process GO:0016829 lyase activity GO:0016831 carboxy-lyase activity |
| InterPro families | IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPR002433 Ornithine decarboxylase IPR000183 Ornithine/DAP/Arg decarboxylase IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal |
| Orthology group | MCL14905 |
Nucleotide sequence:
ATGCCGCGCGTCGAACCGTTTTATGCTGTGAAATGCAACGACGACAGGTTGTTGGTGAGC
ACGCTGGCGGCTCTGGGCGCCGGCTTCGACTGCGCCTCCAAGGCTGAGATAGAACTCGTC
ACCAGCCTCGGAGTCACACCAGATCGTATAATCTTCGCCAACCCCGCCAAGCTGTCCTCT
CACATCCGCTACGCTCGCGAGGCCGGCGTCACGGTGCTGACGGTGGACTCGGACACCGAG
CTGGTCAAGATAAAACAACACATGCCTGATGCCGAGCTGGTGGTCCGTATCCGCTGCGAC
GCGGCGTCCGCGCAGTGTCCTCTGGGGATCAAGTTCGGCTGCGACCCGCTGCTGGAGGCG
CCTCGCTTACTGAAGCTGGCCGCTGTCCTCGGACTCAACGTGGTGGGCATATCCTTCCAC
GCCGGGTCAGGTGCGGGTGAGAGCGCGGTGTACTCGCGCGGGATCCGCCTCGCCCGCGCG
CTGTTCGAGGCGGGCGACGCCGCGGGCCACCGCATGTCTCTGCTGGACCTGGGGGGCGGA
TTCCCCGGACACCACGGCTCCTCCATACGAGAGGTGTCCGAGGTGATATCCGAGGCTCTG
GCCACGTACTTCCCCAGCGGCGGGGTGCGCGTGATCGCGGAACCCGGTCGCTACTTCGCA
GCAGCTGCTTACACTCTGTTCACGCTCGTACACGCCAAGAGACAGCTGCCTGCTGACGGC
GAGGAGGACCCTCACACCATGTACTTCATCAACGACGGTGTGTACGGCTCCTTCAACTGT
GTGCTGTACGACCATCAGGTAGTCACTCCAGAACTACTACAAGAGTCGACCGGGGCCCCA
CAGACTTGTTCTATATGGGGTCCTTCGTGCGACGGTCTGGACTGTGTGATAGAGTCCTGT
CTCCTGCCTCCTCTCGCTGTGGGATCGTGGCTAGAGTGGCGCAACATGGGCGCCTACACC
ATCCCCATCGCTTCACCGTTCAACGGCTTCCCCGTGCCCACGGTCAAGCCCGTCCTGGAC
TACAGGCTGTGGGTGCTCCTCCGCGACATGTGGTCGTCGACGGGCGCTGTGTTCAGCCAC
TCGTGCCCGCCGCCGTCCTCCCCCGTGGACTCCAGCCCGTCACCCTCGCTGTCACTCTCC
CCCTCCCCCTCCCCCGAGGGCTGGGCGCGCGGCAACGATCTCTGCGAGCTGCCCAACTGT
TAA
Protein sequence:
MPRVEPFYAVKCNDDRLLVSTLAALGAGFDCASKAEIELVTSLGVTPDRIIFANPAKLSS
HIRYAREAGVTVLTVDSDTELVKIKQHMPDAELVVRIRCDAASAQCPLGIKFGCDPLLEA
PRLLKLAAVLGLNVVGISFHAGSGAGESAVYSRGIRLARALFEAGDAAGHRMSLLDLGGG
FPGHHGSSIREVSEVISEALATYFPSGGVRVIAEPGRYFAAAAYTLFTLVHAKRQLPADG
EEDPHTMYFINDGVYGSFNCVLYDHQVVTPELLQESTGAPQTCSIWGPSCDGLDCVIESC
LLPPLAVGSWLEWRNMGAYTIPIASPFNGFPVPTVKPVLDYRLWVLLRDMWSSTGAVFSH
SCPPPSSPVDSSPSPSLSLSPSPSPEGWARGNDLCELPNC