| New model in OGS2.0 | DPOGS208094 |
|---|---|
| Genomic Position | scaffold1581:- 60727-65466 |
| See gene structure | |
| CDS Length | 2292 |
| Paired RNAseq reads | 2451 |
| Single RNAseq reads | 5961 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001814 (2e-29) |
| Best Drosophila hit | CG5003 (9e-15) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to CG3731-PB, isoform B [Apis mellifera] (5e-27) |
| Best NR hit (blastx) | PREDICTED: similar to CG3731-PB, isoform B [Apis mellifera] (7e-26) |
| GeneOntology terms | ND |
| InterPro families | IPR001810 F-box domain, cyclin-like IPR022364 F-box domain, Skp2-like |
| Orthology group | MCL16619 |
Nucleotide sequence:
ATGGGATCGGTGAACATGGATTGTGACATGAAAAGGGAGCTCGACGACAGCGGCTGCGTA
CAAGACGATGCTGTGTCGAACGGCCAGGCGGGTCTGTTGGACCTGTCTGATGATGTGCTG
CTGTACATCCTGCGCCACTGCTCCCCGAGGGACCTCAAGGCTTTGGGATACTCGTGTGCC
CGCCTGGGTGTGCTGGTTCAGGAGCGAGCTCTGTGGCGGAGGGTGGACGCCCGGGACGAG
CCCTGCTCCAGCATGAGGCTGTCCTGGTACATAGACAACACGCTCCACGAGGACACACAC
ACGCTCATGATCAGCGGCTACGCGCGCGCTGCTGACGGTTGCCTGGGTCTCATCAACGTG
TCCCGCGAGGAGTCGGAGGTGGAGCGCGAGCTGGCCGACAAGGGCGGAGCACCCTCTCAC
GTCACAGTTCCAGGTGTGTCGGAGGAGCTGCATCAGATCCCGGTGCCGCTCCAGCCGGAC
AGACACCACACCAGGTTCTTCGTCACGGCGCAAGGGACGCCACACCTGCCGCGTTTCCGC
GGCGTGCCGTCGTGGCCGGACCGAATGGCGCGCTGCGGACCCCAGGCCTGCCGCGGACCG
CAGTTCACGCTGGACGCTCCGCTGATGACCCGCCTCACGGACACCTGCCCGCGCCTCGCC
TCGCTCGCGCTGGAATACTGTTGCATCGACTGTAACACGACGTCTCTGGGCAGCTTCCCC
CGCACCCTCAAGAAGCTCTCCCTCCGCGGCTCCAAGTGCTTCAACATGACCATCGACAAG
TCCTTCCTCTTCAAGATACAGGACTACCTGCCGGCGCTCGAGAGCCTGGACGTGTCGGAG
TGCGAGTGGATGGACCCGGCGACGCTCCTGCCGCTCAGCAAGCTGCCGGCCCTCCAGGAG
CTGTTCCTCAGGGACTGCCACAAGCTGGCGGAGTTCGTGGCGTACGCCTCCCTCACCGCC
AGATACGGGTTCAGGACACTGAAGGTGTTGGACCTGCGAGGGTCTCCGGTCGGGGACTCG
GAGGTGTCGGCGCTGGGCTGGCTGCCGCAGCTGGAGCGTCTGTGGCTGGCCGCGGCGCGC
GTCGAGAACAGGAGCCCGCACGCTCACTACGCAGACGACGCAGAGACCTGGCACACGGAG
CTGGAGCACTGGGAGACGGCGGAGCGGGAGTACTTCAAGTCTAGACCAAGCAACGGAACA
CTCGAAGAAACGACGCCAGGCTGTAAGTATGACGGCGAGAAGGAGGCAGCGCGCCAGGAA
CAGAGAACAGACAGAGCCACATGTGACGACAGAGGGGAGAAGAAAGAGAACAAGAAGAGA
AAAACGAGCGACGAGATGAACGGCGGGGAGGGAGGAAAGAGGGCGCGGGTGGGGGGAGGG
GCGGAGGCGAACGGAGAGAGGGCGGGCAGAGACGGCAGAGACCGGGAGAACAACAGACAC
AGGAACAGCCCGGACTGTATCGTGGACTGTATTAAGATAGACCAGTTGATAGACGTGGGC
GAGCTGAGGAGGGGCCGGCAGAACGAGGTCATCGTCATAGCCAACTCCGCCAAGGTCAGG
AGTCCCACCAGGCCTGCGCCCCACGACCGGTACGTGTGCCTCAGGAGGAGCCGGGACCGG
GATGGAGGGCAGGGGGAGGGAGGGGAGGGGAGCGGCAGCGTCAACCAGGGGGCGAGCACC
TCCAGGGATCACAAGGATGGAGACGACACGGACAACGAGGACGACGCCAGCGACAACGGC
AACGAGAAGTACGTGCACTTCAGGCAGAACCGCGAGCCGGTGTTCGTGGACTGCGCGCCG
CCCGAGCCGCCGCCGCCCGTGCAGTACCAGATCGAGCCGCGGCACCACGTGCTGTACGTG
AGCGTGGGCCCGCAGGTCAACACGTACCGCTTCCCGCGCGACTCGGCGGACCTGGAGCGC
CAGGTGTGCCTCAGCCTGGCGCCCGCGCACGTGGACTCCAGCTCGCTGGTCACGGACTTC
GCGATCCGGCGCTTCGGGCGCGCGGACGGCGAGGACGTCAACATCATCCACATAGGACCC
AACGGGCCCATGCTGGTGGGGCAGAGCGCCGGCTCGCGGCCCGACCGCTCCAACCTGCGC
CTGCTGTCCGTCACGGGCTACCGGAACATCACGGACCGCAGCCTCTCGCACCTGGCCTCC
GCCGCGCCGCGCCTCGCGTCGCTGGACTTCCGCGAGACCAACGTCAGCGAGGCCGGCGCC
AGGAGCTTCCTCGCCCTGCGCCCCGACTGCGAGCTGGTCTACAGCGCCTTCGTCGACGAC
AAGGACAACTAG
Protein sequence:
MGSVNMDCDMKRELDDSGCVQDDAVSNGQAGLLDLSDDVLLYILRHCSPRDLKALGYSCA
RLGVLVQERALWRRVDARDEPCSSMRLSWYIDNTLHEDTHTLMISGYARAADGCLGLINV
SREESEVERELADKGGAPSHVTVPGVSEELHQIPVPLQPDRHHTRFFVTAQGTPHLPRFR
GVPSWPDRMARCGPQACRGPQFTLDAPLMTRLTDTCPRLASLALEYCCIDCNTTSLGSFP
RTLKKLSLRGSKCFNMTIDKSFLFKIQDYLPALESLDVSECEWMDPATLLPLSKLPALQE
LFLRDCHKLAEFVAYASLTARYGFRTLKVLDLRGSPVGDSEVSALGWLPQLERLWLAAAR
VENRSPHAHYADDAETWHTELEHWETAEREYFKSRPSNGTLEETTPGCKYDGEKEAARQE
QRTDRATCDDRGEKKENKKRKTSDEMNGGEGGKRARVGGGAEANGERAGRDGRDRENNRH
RNSPDCIVDCIKIDQLIDVGELRRGRQNEVIVIANSAKVRSPTRPAPHDRYVCLRRSRDR
DGGQGEGGEGSGSVNQGASTSRDHKDGDDTDNEDDASDNGNEKYVHFRQNREPVFVDCAP
PEPPPPVQYQIEPRHHVLYVSVGPQVNTYRFPRDSADLERQVCLSLAPAHVDSSSLVTDF
AIRRFGRADGEDVNIIHIGPNGPMLVGQSAGSRPDRSNLRLLSVTGYRNITDRSLSHLAS
AAPRLASLDFRETNVSEAGARSFLALRPDCELVYSAFVDDKDN