New model in OGS2.0 | DPOGS212895  |
---|---|
Genomic Position | scaffold22083:- 1262-2845 |
See gene structure | |
CDS Length | 1584 |
Paired RNAseq reads   | 283 |
Single RNAseq reads   | 682 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003226 (2e-118) |
Best Drosophila hit   | wings down (6e-29) |
Best Human hit | zinc finger protein 300 isoform 1 (5e-37) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC014456 [Tribolium castaneum] (3e-60) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC014456 [Tribolium castaneum] (4e-63) |
GeneOntology terms    | GO:0003677 DNA binding GO:0005622 intracellular GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0046872 metal ion binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | MCL30905 |
Nucleotide sequence:
ATGTCCGAACAAATAGAAACTTATTGCCGGCTGTGTGCTGAACCGACGCCTAAAACCCAG
CTCATAGAACCAGAAGAAGATGTAGCTATTACTTCCAAAATACTCGCCAAACTAACCTGG
ATCAACGTTGATGTGTCTGTATCAAACGGCCTTCCGAATACAATTTGTTTCTCCTGCTTC
GACCAGCTCGAGAGAACTTGGGCTTTCTTAAACAATGTAAGGTGTGCACAGGACAAATTA
AATACTATATTTAAAAAGGATTCCGAGGAAAAAGTTATTGAAATAGATTCGAAAAACAAT
TTGAATTGCCAGAATGTTGCTGGAAAACCTCTGGACAAAGATTGGGAGTCAGTGGAAGGT
TTTAAATCGGAAATTAAAGTTGAAAACGCTGATATATTACAAGTCATACCGATAACGGAT
ATAAAAGCGGAAGCAGATAGTGAAGAAGATTTTAAACTAAGAATAGATTATGATAGTTTA
GATTTAAGTTCGACTGATAGCGAAGCACCCTTAGTTATAACAAAAAAGAACAAGAAATTA
AAACGTAAAGTAAGAGAGAGCAAGAAAGATGTAAATGAAATCTCAGTAGACTCGATTGTA
TCATCGTGGGACGAACAAGGATGTAGATGTGCCGAGTGTGATGCTCAATGCAAAAGCATA
TTATCATTACAACTTCACTCAATCCAAATACACAATAGCTGTTGCGTATTCAAATGTATA
GACTGCTCAAAAGTCGCTAGAGGTTACCGATCATTCATAAGACACATACGGACACACAAC
AGAGATTTGAGACACTGCTGCGAATATTGCAACGAAGTGTTCAGCTCGATATCTAAACTA
AAATTACATAAGGTTAAAGAGCACAGATTTGTGTTCAAGACTAAATGCACGTCTTGCGGC
GCCGGCTTTGATACTGTCGAACAATTAAACGAACACAAGGCGCTATTTGTTAAGGACGCC
AAGAAGATTAAAATATCTGAAGCAATTAAAGAGGAAAGTTCTGAAATGAAGTGTGATCAT
TGCGAGAAAGTTTTTAAAACAAGAGCCAATCTCTTGCAGCATAAATTACTCCACACCGAG
AGGATACGGAATTTTGCATGTCATATATGCGGCAAGATGTTCTTCACCAAGGGCACCTTA
GTAACACACATGGTTACTCACGAAGACACAAAGCCTTTTAAATGCGACCACTGTCCCTTG
ACCTTCCGAGCTAAAGGCAACCTTATATCCCATATATCATTACATTCTGGCCTCAAACCG
TTCATATGTGAGCAATGTGGTAAAAGTTTCAGAGTTAAAAGACACTTAATGTCACATTCC
ATAGTACACACAGATCTAAGACCATTCGTTTGTGAGTACTGCCATAAGGCTTTCCGTTTT
AAGACCCGTTTAAATCTCCACCTACGACAACACACCGGGGTCAAGCCGTACAAATGTGTT
TACTGCCAACGAGATTTCACAAACGGATCCAATTATAAGAAACACATGAAGAGACGCCAC
GGCATCGACACATCATCGAGAATAATGTTCAATAACTCAAATCCCGTCAAAGTTGGTGCT
TTTAATTTAAAAGCAAATTCATAA
Protein sequence:
MSEQIETYCRLCAEPTPKTQLIEPEEDVAITSKILAKLTWINVDVSVSNGLPNTICFSCF
DQLERTWAFLNNVRCAQDKLNTIFKKDSEEKVIEIDSKNNLNCQNVAGKPLDKDWESVEG
FKSEIKVENADILQVIPITDIKAEADSEEDFKLRIDYDSLDLSSTDSEAPLVITKKNKKL
KRKVRESKKDVNEISVDSIVSSWDEQGCRCAECDAQCKSILSLQLHSIQIHNSCCVFKCI
DCSKVARGYRSFIRHIRTHNRDLRHCCEYCNEVFSSISKLKLHKVKEHRFVFKTKCTSCG
AGFDTVEQLNEHKALFVKDAKKIKISEAIKEESSEMKCDHCEKVFKTRANLLQHKLLHTE
RIRNFACHICGKMFFTKGTLVTHMVTHEDTKPFKCDHCPLTFRAKGNLISHISLHSGLKP
FICEQCGKSFRVKRHLMSHSIVHTDLRPFVCEYCHKAFRFKTRLNLHLRQHTGVKPYKCV
YCQRDFTNGSNYKKHMKRRHGIDTSSRIMFNNSNPVKVGAFNLKANS