| New model in OGS2.0 | DPOGS209719 |
|---|---|
| Genomic Position | scaffold1689:+ 13395-15440 |
| See gene structure | |
| CDS Length | 2046 |
| Paired RNAseq reads | 895 |
| Single RNAseq reads | 2152 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008930 (0.0) |
| Best Drosophila hit | Arginyl-tRNA synthetase (0.0) |
| Best Human hit | arginyl-tRNA synthetase, cytoplasmic (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0004812 aminoacyl-tRNA ligase activity GO:0004814 arginine-tRNA ligase activity GO:0005524 ATP binding GO:0005737 cytoplasm GO:0006412 translation GO:0006418 tRNA aminoacylation for protein translation GO:0006420 arginyl-tRNA aminoacylation GO:0016874 ligase activity |
| InterPro families | IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR008909 DALR anticodon binding IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding IPR005148 Arginyl tRNA synthetase, class Ic, N-terminal IPR001278 Arginyl-tRNA synthetase, class Ic IPR015945 Arginyl-tRNA synthetase, class Ic, core IPR014729 Rossmann-like alpha/beta/alpha sandwich fold |
| Orthology group | MCL13738 |
Nucleotide sequence:
ATGACAGATATAAATCAAAAAGCACTTGAAGAAAGGACTGCCAAAGCCGAAAAGGAAGCA
AAGGCAATTGAAGAGGAATTAACTAAGCTAGCAAAAGGAGATCTGAGTTATATTGGTGAT
GAACGTCTTGACAAACTAATGTCTGACAATGAAAAATATAAACATCGCTTAGCCATTCTT
CAAAACGCTATTGAAGTTGAAAGATCAGTAGGGTCTTCTAAAAAGACGTCTAAAAAACGT
CCTAATCTACTAAACGATATTAATTCTATCGAAGGTACTATCTGCATTTTAGATGAACTT
AAAAATATATTTGAAATTGCAATTACATCTGCTTACCCAGAACTGGAGGATCCACCTGTT
GTGTTAACATTATCGGGCAACAACCCTAAATTTGGAGACTATCAGTGTAATTCTGCTATG
CCTATATCACAATTGCTTAAATCTAAAAATATAAAGACTAATCCTAGAGAAGTAGCAAAC
AATATTTTAAATAAGATGCCTGCATCTCCACTCATTGAGAAAACAGAAGTTGCCGGTGCT
GGTTTTCTAAATATCTACTTGAATAGGGCATTTGCTGAACATGTCCTCAGCTGTATTTTA
CGACTTGGTGTAAAACCACCTCCTGTCAAACGAGAGAGGATAATTGTAGACTTTTCTTCA
CCAAATATTGCAAAAGAAATGCATGTAGGACATTTAAGGTCGACTATTATAGGAGATAGT
ATTTGTCGGGCCTTGGAGTTTCTGGACCATGATGTTCTCCGCTTAAACCATCTTGGTGAC
TGGGGAACTCAGTTTGGAATGCTCATTGCTCATTTACAGGACAAGTATCCAAATTTCAAA
ACACATTCTCCTCCAATATCAGATTTACAAGCATTTTACAAAGAGTCAAAGAAAAGATTT
GATGAAGATGAAGAATTTAAAAAGAGGGCATATTCCTGTGTGGTTAAACTACAGTCCGGT
GATCCTGATTACATATCTGCTTGGAAGTTGATATGCGAAGTCTCCAGGCAAGAGTTCCAA
AAGATATACGATCGCTTGGACATTAAAATTGAAGACAGGGGGGAATCCTTCTACCAAAGT
AGAATGGAAAAAATTGTTAAGGAATTAAAAGATGGTGGTTACTTAGAGGAAGATGAAGGA
CGTCTTATAATGTGGAGCGACCCCAACAACCATGATGGAATACCACTTACAATTGTGAAG
TCTGACGGTGGTTATACCTATGACACTTCTGATATGGCTACCATAAGAAATCGCGTGGAG
GAAGAGAAAGGTGACCGATTTATCTATGTGACTGATGTTGGACAATACACTCACTTCGTG
CTCATCGAGGCATGCGCCAGAAGGTTCGGTATCCTCAAGGACGGTAAGAAAATAGAACAT
GTCGGATTTGGTGTTGTTCTTGGCGAAGACAAGAAGAAATTTAAAACACGATCTGGCGAT
ACTATAAAGTTGATACAATTATTAGATGAAGGTCTTAAAAGAGCTCTCGACAAACTGGTA
GAAAAAGGACGCGACAAGGTTCTTACGCCTGAGGAATTAAAGCAAGCCCAGGAAGCGGTG
GCGTATGGGTGCATAAAATACGCTGATCTGTCTCACAACAGAATCAATGATTACATATTT
TCGTTTGATAAAATGTTAGATGATAAAGGCAACACCGCGGTATACTTATTGTATGCTTTA
ACTCGCATCAGATCTATTGCGAGGACGGCACAGATATCCACAGATAAACTGTTGGAGGAG
GTTCACAAGTCTGGGTTTAAACTGGTACATGATGCCGAGTGGAAACTTGGCAAAGTCCTT
CTCAGATTCCCTGAGGTTATTCTAAAAGTTGCTAATGATCTTTATTTGCATAGTCTGTGT
GAATATTTGTACGAAATCAGTTCCGCGTTCACAGACTTTTATGACAAGTGTTACTGTGTT
GAGAAAGACAAAAGCGGTAACGTTGTTAAAATATTATATGAAAGATTGATGCTTTGCGAA
GTTACTGCCAGAGTTATGGAACGATGTCTCGACATCCTGGGCATCAAGACGGTCTCTAAA
ATGTAA
Protein sequence:
MTDINQKALEERTAKAEKEAKAIEEELTKLAKGDLSYIGDERLDKLMSDNEKYKHRLAIL
QNAIEVERSVGSSKKTSKKRPNLLNDINSIEGTICILDELKNIFEIAITSAYPELEDPPV
VLTLSGNNPKFGDYQCNSAMPISQLLKSKNIKTNPREVANNILNKMPASPLIEKTEVAGA
GFLNIYLNRAFAEHVLSCILRLGVKPPPVKRERIIVDFSSPNIAKEMHVGHLRSTIIGDS
ICRALEFLDHDVLRLNHLGDWGTQFGMLIAHLQDKYPNFKTHSPPISDLQAFYKESKKRF
DEDEEFKKRAYSCVVKLQSGDPDYISAWKLICEVSRQEFQKIYDRLDIKIEDRGESFYQS
RMEKIVKELKDGGYLEEDEGRLIMWSDPNNHDGIPLTIVKSDGGYTYDTSDMATIRNRVE
EEKGDRFIYVTDVGQYTHFVLIEACARRFGILKDGKKIEHVGFGVVLGEDKKKFKTRSGD
TIKLIQLLDEGLKRALDKLVEKGRDKVLTPEELKQAQEAVAYGCIKYADLSHNRINDYIF
SFDKMLDDKGNTAVYLLYALTRIRSIARTAQISTDKLLEEVHKSGFKLVHDAEWKLGKVL
LRFPEVILKVANDLYLHSLCEYLYEISSAFTDFYDKCYCVEKDKSGNVVKILYERLMLCE
VTARVMERCLDILGIKTVSKM