New model in OGS2.0 | DPOGS204179  |
---|---|
Genomic Position | scaffold1124:+ 11479-15630 |
See gene structure | |
CDS Length | 762 |
Paired RNAseq reads   | 12 |
Single RNAseq reads   | 48 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003104 (3e-15) |
Best Drosophila hit   | CG6048 (5e-13) |
Best Human hit | transmembrane protease serine 11F (1e-16) |
Best NR hit (blastp)   | trypsin-like serine proteinase [Anthonomus grandis] (1e-16) |
Best NR hit (blastx)   | trypsin-like serine proteinase [Anthonomus grandis] (4e-15) |
GeneOntology terms    | GO:0016020 membrane GO:0005887 integral to plasma membrane GO:0004252 serine-type endopeptidase activity GO:0006508 proteolysis GO:0005576 extracellular region GO:0008233 peptidase activity |
InterPro families    | IPR001254 Peptidase S1/S6, chymotrypsin/Hap IPR018114 Peptidase S1/S6, chymotrypsin/Hap, active site IPR009003 Peptidase cysteine/serine, trypsin-like IPR001314 Peptidase S1A, chymotrypsin-type |
Orthology group | ND |
Nucleotide sequence:
ATGCTTATGTTTACATATAATCACGTGGTCGCTCACCGTGCCAAGGTTGTCAAAGCCGTG
CTGCAGAGCGAGCTCGTGGGCCTCCTCGTGGCCGACGGATCTCTTGAAACGGACGAGGAA
CGAGTTCGTGAAGACTTCCCCAGCGGCCGCGGCAACCAGCAGCGGAGAATCGTGAATGGT
GAATACTCTCTGATACGTGATAACGCTCACGCTGTACTTCTACATATAATAAGGAGAGAT
CATTCGGCTCACATATGCGGATCATCTGTCCTGAACCAAAACTTCCTACTGTCGGCTGCG
CATTGTTTTTACGAGTTGGACATTGTTCAAGTGATAGCAATAGCCGGTCACGAAGATGTG
AGAAAGTCTACCGTATCAAGAATTGCATCAAAAGTTACAATACACGAGCACTTTCAACTG
CAAACTGTAGAAAATGACATAGCCTTAGTTAGTCTAAACGGCACACTGCCTTTAGGTGCA
AATATCAAACGTATTGTTTTAAAGAAAAGTTTTCCAAGACAGGCAAAGGGCATACTTGCG
GGCTGGGGTTATATTAATGATGATGATGGTCCTCCATCACAAATTTTGAAAATGGTCAAA
CAAACAGTACTATCAAGACGAGATTGTAGATATCTTAAATTAAGGCCGGGGATGCTATGT
GCTGGGAGTTTGATTCCAACAGAATCGAGACCAGCCAATCTACCGTATCAAGAATTGCAT
CAAAAGTTACAATACACGAGCACTTTCAACTGCAAACTGTAG
Protein sequence:
MLMFTYNHVVAHRAKVVKAVLQSELVGLLVADGSLETDEERVREDFPSGRGNQQRRIVNG
EYSLIRDNAHAVLLHIIRRDHSAHICGSSVLNQNFLLSAAHCFYELDIVQVIAIAGHEDV
RKSTVSRIASKVTIHEHFQLQTVENDIALVSLNGTLPLGANIKRIVLKKSFPRQAKGILA
GWGYINDDDGPPSQILKMVKQTVLSRRDCRYLKLRPGMLCAGSLIPTESRPANLPYQELH
QKLQYTSTFNCKL