| New model in OGS2.0 | DPOGS210496 |
|---|---|
| Genomic Position | scaffold297:- 130507-132608 |
| See gene structure | |
| CDS Length | 1893 |
| Paired RNAseq reads | 11 |
| Single RNAseq reads | 31 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012586 (0.0) |
| Best Drosophila hit | CG9518 (4e-93) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (1e-58) |
| Best NR hit (blastp) | PREDICTED: similar to alcohol dehydrogenase [Acyrthosiphon pisum] (1e-128) |
| Best NR hit (blastx) | PREDICTED: similar to alcohol dehydrogenase [Acyrthosiphon pisum] (2e-117) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
| InterPro families | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR012132 Glucose-methanol-choline oxidoreductase IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal |
| Orthology group | MCL40762 |
Nucleotide sequence:
ATGACCTCTAGCAACATTACAGAGGACCTTTGTAACATATGCGACGGCAAAATCGAATGT
GCTCCCACCGCCATACTACTGATAGCGCTCGTCCACACTCTGTACGGACACATTGGACCT
GAACCGGATTACTTCGGTAAGAAAAAACCGAGTCTGATGAGACAGGAGAACGACCAGCCG
TCTCAAGGTTACATGAGGTTTGAACCGGTCCATAGACACAAGATACTCGGTGAGGATAGA
AAAGACGACTTGGACTCGGCCAACAAATACGACTTCATAGTGGTTGGAGGTGGCACGGCT
GGGTGTGTTGTGGCGAGTCGACTTTCAGAGAACAGGAAATGGAAGGTTGTCTTGCTGGTG
GAAGCTGGTCCAGAGGAACCAAAAATGGCTCTCATACCTGGACTCACCAGCGAGTTTAAA
GGCTCGGCTCTTGACTGGCAATATTCTATGAGACCAAAAAAGGGGTTCTGTCAAGAGCGT
GATTTAAAAGGTTGCGAGGTCGTTCAAGGTCGAGTTCTCGGGGGAAGTTCAACAATCAAC
GACATGGCGTACATGAGAGGCAGTCCTGCCGACTATGATGAGTGGGCGCTCAATGGAAAC
GAAGGCTGGAGTTTTAGTCAAGTGCTGCCTTACTTCAAGTATTCGGAAGGAAATTACGAC
AAAGACATATCAAAAAACAAATTCTTCCACTCCACGCAGGGACCCCTAGATGTCGGACGA
TATCCTTTCGTAGACGACAATGTAGACGTTCTTCTCAGTGCTTTCAATGAACTCGGTTAC
AACTACACGGATATAAATGGAAGAAACCAGTTGGGTTTCATGAGAGTCCAGGCCATGTCC
TATTTTGGTGAAAGAGTCAGTGCTTACACAGCGTTCATTGAACCCATCAGGAAATTGAGG
ACGAATATAGATATAGTATCAGAGGCTCTGGTAACCAAGATATTATTAGAAGAGAAGGAA
GATAGTCTCAGAGCAGTAGGTATAGAATATTACAAAAATGGTACAAACGTAGTAGTAAAA
GCGTTTAAAGAAATAATTTTGAGTGCTGGGGCAATCAATTCACCAAAAATTCTTATGCAA
TCAGGTATCGGTCCACGAGAATACTTGGAATATTTGGACATGAAGGTATATTATGATTTA
CCAGTGGGAGCAAACTTTCACGATCACTTGTCCGTGTGTTTGCCTGTCATTAAACTGACT
AAGTCGTCTACGATTTCAAAATTCTCTGAAAAGTTGAAGGATATAACAACATACTATACA
AATGGTCTCGGACCTCTCTCGTCTAACTTTCAAGTAATAGCGTTTTTCGAATCGAGTATA
TCCGATATTTTGGGGACGCCTGATATTGAATTTAGGTTTAGAGGTCACGACTCAAATATG
TATTACGATAAAATAGACATTTGCACTTCATTAATAACACCAAAAAGTCGAGGACAAATT
GTATTAAATGCAACGGATCCTGTATTCGGCAAACCTTTGATTTATCCGAATTTTCTCAAA
GATCCTTCAGACGAGAAAAAAATATTAGAAGGCATCCAGGAAGTCGTAAAATTATTTGAT
ACTGAAGTGTTTAAAGCTGCTGAGTTCGAATTTGATCCGCGACCGATATTAGACAACCAT
TGTCGTGAACACGACAGAGTCTCAGAAGAGTTTTGGTCGTGTATTATAAGACAGTTCTCA
GCACCTCTTCATAACTATGTAGGGACATGTAAGATGGGTCCCTCAAAAGACCCCGAGTCT
GTTGTCGATAATAGCTTACGAGTTTACGGAGTTTCTAATTTGAGAGTCGTAGACGCTTCA
ATAATTCCCAAAATTACCAGAGGTGCCACCGGTGCCCCGGTGATAATGATTGCTGAAAAA
GCAAGTGACCTAATAAAGACTACTTGGTACTAA
Protein sequence:
MTSSNITEDLCNICDGKIECAPTAILLIALVHTLYGHIGPEPDYFGKKKPSLMRQENDQP
SQGYMRFEPVHRHKILGEDRKDDLDSANKYDFIVVGGGTAGCVVASRLSENRKWKVVLLV
EAGPEEPKMALIPGLTSEFKGSALDWQYSMRPKKGFCQERDLKGCEVVQGRVLGGSSTIN
DMAYMRGSPADYDEWALNGNEGWSFSQVLPYFKYSEGNYDKDISKNKFFHSTQGPLDVGR
YPFVDDNVDVLLSAFNELGYNYTDINGRNQLGFMRVQAMSYFGERVSAYTAFIEPIRKLR
TNIDIVSEALVTKILLEEKEDSLRAVGIEYYKNGTNVVVKAFKEIILSAGAINSPKILMQ
SGIGPREYLEYLDMKVYYDLPVGANFHDHLSVCLPVIKLTKSSTISKFSEKLKDITTYYT
NGLGPLSSNFQVIAFFESSISDILGTPDIEFRFRGHDSNMYYDKIDICTSLITPKSRGQI
VLNATDPVFGKPLIYPNFLKDPSDEKKILEGIQEVVKLFDTEVFKAAEFEFDPRPILDNH
CREHDRVSEEFWSCIIRQFSAPLHNYVGTCKMGPSKDPESVVDNSLRVYGVSNLRVVDAS
IIPKITRGATGAPVIMIAEKASDLIKTTWY