| New model in OGS2.0 | DPOGS205610 |
|---|---|
| Genomic Position | scaffold513:+ 7153-12769 |
| See gene structure | |
| CDS Length | 2556 |
| Paired RNAseq reads | 105 |
| Single RNAseq reads | 262 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007145 (2e-95) |
| Best Drosophila hit | supernumerary limbs (4e-07) |
| Best Human hit | WD repeat, SAM and U-box domain-containing protein 1 (2e-16) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP005577-PA [Tribolium castaneum] (1e-71) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP005577-PA [Tribolium castaneum] (5e-57) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0000151 ubiquitin ligase complex |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR003613 U box domain IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain IPR013083 Zinc finger, RING/FYVE/PHD-type IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR020472 G-protein beta WD-40 repeat |
| Orthology group | MCL17302 |
Nucleotide sequence:
ATGATTGACCCAGTGTTGGTGACGTCACTTCAAGTAGGTCGCCGCGAGGTGACCTGTTTG
GACACTATTTGTGGACGTCTGGTTGCGGGCATAGGAGACGGAACGCTAAAACTCTGGCGA
TGGAACCGATCCTCAGGCTGGTTACTGCTCGCTGAACAAAAGCGTGCACATCGATATGGT
GTCACAGGAACACGCTTTGCCACTTCCGGAGTTCTACTTGCAACAGTTGGAATTGATGGT
GCTGCAAGAATATGGTCTGCATATGAAGGTCTGCTTGAGAAACGTACCTTGGCTGGTCCG
GATACGGCAGCAGCGAGATCTTTGCAGTGGGCGTCGAGCGAACGATTGGCTGTTGGACAC
GATGACGGAGGGGTTCGGGTATGGGATGTCCGCGGTGGAGCGTTGCTAGCATACATACGA
CCTCATGAAGGGGCAGTTTACGCGCTAGCAACATTGGCTTATAATGCTCTCTTACTTACT
TCTTGTACTGATGGTGTTTTAAAAGTTTTTGATTTTCAAGAAGTAACTGCGCATGGAAAC
GACGGCACTGCAGGACCGGCACCACTTTTTTGGGAAGATGGAGCTCATGATCTGGGAGCA
CAATGTAGTACGGAATGTGGTAGCGATGCAGCTACTGGCGGACACGACGGACGCGTGCGT
ATTTGGCGGGTTTTGGGTGTAGGACGACAGAGACGAGTCGAAGCAGATGTAACTTTGACT
GGTCACACAGCTGCTGTCACATCCTTGAGATGGAAACGTGACCTTCTGACATCTGCGTCA
CTAGATCGCACTGCGAGGTTATGGTCTGTCAGCTCAACCGTTTGTCTCCGAGTTTTACAT
GCACATTCACGTTACCTTACATGTATTGCTTTATCAATGGATCTGAGATATATAATAACG
GGTTCAAACGATAAAACAATACGGACATGGTCTTTGGGCGTCTTCTCTATAGATGATGAC
ATTCAACCGGAATGTAATCATATTGTACATTTTGGACTTGGTGACCTGGAGGGAATCGGT
CCAGTAGATGAGGATATTGAAGATGCTAATGACACAGTGGTATGTACTAGTATAGGAACA
CATCGCATCGACCGCGTGCATCATGCCGCAGCCATTAACTGCATTGCTGCTTCCCAGTCA
TTAATCGCAACTGCCTCCAGTGATGGATCCGTAAAAATATTCAGATGGTTTTGGAAAGAC
GAAGGTTTTAAACTTAATCTAGAGTTGGAACTATCTGCTCACACTTATCCAGCTTTAGCC
GTCGATTTTGGAGCAAATGATGCACTTTTACTAAGTGCTGGGCTTGATGGCTGTGCGCGG
CTTTGGGATATTATGGAACGGAAGAAAGGAATAGAAAAGAAGTTTAAAGGGTTGTTGTTT
TATTACAGAGTATATCCAGGTCTTGTAGAAGCAGCGTTATGTTGTGCATGGTCTGCAGAC
GGTGCACTCGCGGTTGCAGGAGGAGCCGCTGGTGAATTACAGCTGCTCGCTCCTCCGCGT
CCAGACTGTTTGTATCAACAGAGTGATGCACATGATCTTGGAGTTCTTAGTTGTGATTTT
GCACCCATTTCCCACAATCATGCGTCCGAAAGTGAAAATAAAACGTACCTTCTCGCAACG
GGAGGCCGAGATGCTCTAATAAAATTGTGGCAAATAACTTCGGAAGTTGAAAACGAGCAC
ATTGAATGTGTATCATTGAAGCTCGCAAGAGCTCTAGCAGCGTATGGCAGTGCAGTGCAA
TGTGTCCGTTGGGGTCAGTTTGGTCGATATGAGAATGAGTTGGCACTAGCCACAGGTGGT
GCAGATCGCTGGGTTCGCGTGTGGCGTGTAACTGAAACTAAATCGGGTCTGGAAGCTATA
GCGACAGTGTCAGTGCCTGCTGGAGCTGCAGGAGGCGCGCCAGCTGTGCGTCTTTTAGCC
TACGAACGTACGTCTCTGCTAGCCGTTGGATCATTATCCGGTACACTTGCTTTGTGGCAA
CTTCCAAATACCGATCTCATGGAAGAATGTGAGGGAGCAGAACCACGATTTTGGAGCATA
AATGGTGTCTTGAGATGGTTATATGAATATATTACAAGGTCAAACGAGGATACAGATAAT
GTAGAAGTCATAGAAAAGCGTCTGACTGAAGCAGCACGAACCTCACAAATGACAGGCGCT
CGACTACTGGATGACCCTCTTGAAGAGTTAATGAAGGCTTTTGGTTACGAAGATGAAAAT
GACGAAGAAAACACCGCAAACGATGAAAACACCGTCATACGTGACAGGCTAATTGATGAA
ATACTTTGGTTACGCAGGGAGCCCATGAACCTCGAGCTGGAGTCATCGATCCCGCACGCA
CTACGATGTCCGATATCGCACGAAGTGATGACAGAGCCAGCGCGAGCTGCTGATGGTTTC
ACCTACGAACGACAGACCTTCCTTGACTGGTGCCTGGCTACCGGACCAGAGGCGGTACGG
TCACCGGTAACCGGTCGTCGCCTACGTAGTTCGGTTGTGGCCCCAAACAGAAAGTTGCGA
GAGCGACTTCGAGAACACTGCGCTTGGAAACGGTAG
Protein sequence:
MIDPVLVTSLQVGRREVTCLDTICGRLVAGIGDGTLKLWRWNRSSGWLLLAEQKRAHRYG
VTGTRFATSGVLLATVGIDGAARIWSAYEGLLEKRTLAGPDTAAARSLQWASSERLAVGH
DDGGVRVWDVRGGALLAYIRPHEGAVYALATLAYNALLLTSCTDGVLKVFDFQEVTAHGN
DGTAGPAPLFWEDGAHDLGAQCSTECGSDAATGGHDGRVRIWRVLGVGRQRRVEADVTLT
GHTAAVTSLRWKRDLLTSASLDRTARLWSVSSTVCLRVLHAHSRYLTCIALSMDLRYIIT
GSNDKTIRTWSLGVFSIDDDIQPECNHIVHFGLGDLEGIGPVDEDIEDANDTVVCTSIGT
HRIDRVHHAAAINCIAASQSLIATASSDGSVKIFRWFWKDEGFKLNLELELSAHTYPALA
VDFGANDALLLSAGLDGCARLWDIMERKKGIEKKFKGLLFYYRVYPGLVEAALCCAWSAD
GALAVAGGAAGELQLLAPPRPDCLYQQSDAHDLGVLSCDFAPISHNHASESENKTYLLAT
GGRDALIKLWQITSEVENEHIECVSLKLARALAAYGSAVQCVRWGQFGRYENELALATGG
ADRWVRVWRVTETKSGLEAIATVSVPAGAAGGAPAVRLLAYERTSLLAVGSLSGTLALWQ
LPNTDLMEECEGAEPRFWSINGVLRWLYEYITRSNEDTDNVEVIEKRLTEAARTSQMTGA
RLLDDPLEELMKAFGYEDENDEENTANDENTVIRDRLIDEILWLRREPMNLELESSIPHA
LRCPISHEVMTEPARAADGFTYERQTFLDWCLATGPEAVRSPVTGRRLRSSVVAPNRKLR
ERLREHCAWKR