| New model in OGS2.0 | DPOGS210957 |
|---|---|
| Genomic Position | scaffold215:+ 97900-114496 |
| See gene structure | |
| CDS Length | 1473 |
| Paired RNAseq reads | 71 |
| Single RNAseq reads | 270 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006384 (7e-62) |
| Best Drosophila hit | abdominal B, isoform B (8e-30) |
| Best Human hit | homeobox protein Hox-A9 (3e-18) |
| Best NR hit (blastp) | abdominal B isoform RBS [Bombyx mori] (1e-126) |
| Best NR hit (blastx) | abdominal B isoform RBL [Bombyx mori] (2e-110) |
| GeneOntology terms | GO:0008406 gonad development GO:0035224 genital disc anterior/posterior pattern formation GO:0007506 gonadal mesoderm development GO:0008354 germ cell migration GO:0007280 pole cell migration GO:0003704 specific RNA polymerase II transcription factor activity GO:0005634 nucleus GO:0035277 spiracle morphogenesis, open tracheal system GO:0007494 midgut development GO:0008595 anterior/posterior axis specification, embryo GO:0007385 specification of segmental identity, abdomen GO:0035215 genital disc development GO:0045705 negative regulation of salivary gland boundary specification GO:0048071 sex-specific pigmentation GO:0009997 negative regulation of cardioblast cell fate specification GO:0045843 negative regulation of striated muscle tissue development GO:0007484 imaginal disc-derived genitalia development GO:0048066 developmental pigmentation GO:0007548 sex differentiation GO:0048087 positive regulation of developmental pigmentation GO:0007507 heart development GO:0007431 salivary gland development GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0008584 male gonad development GO:0035225 determination of genital disc primordium GO:0035263 genital disc sexually dimorphic development GO:0030539 male genitalia development GO:0035261 external genitalia morphogenesis GO:0030540 female genitalia development GO:0003700 sequence-specific DNA binding transcription factor activity GO:0007424 open tracheal system development GO:0007486 imaginal disc-derived female genitalia development |
| InterPro families | IPR001356 Homeobox IPR009057 Homeodomain-like IPR017970 Homeobox, conserved site IPR012287 Homeodomain-related IPR020479 Homeobox, eukaryotic |
| Orthology group | MCL15497 |
Nucleotide sequence:
ATGTCCATATCTCCGCCATATTCGTCTCTCTGGGAGGATTGTTCTGATTGGCGCGCCAGG
CAACATGGCGTGTTGCGGGTAAGGTCCGGGTGCGGCGTGCCTCGACGACCTTACAAACAG
GTGAGGAGACGACGCTACACAGAACATGATACTAAGTCTCATGTCGGGCGGGCGGGCGCT
ACGGGTGCAGTTCTAGTTCGTCCGCCCGCCGCTAGATGGAGCGTGTTCGCGCGTGTGTGC
GCCGCGCCGCACACCGCCTTGCGCTGCCACTCCGCGCTCGACCGCGCTGCCGACCGCGCG
CTTCTCATAGCCGCTTACACGCGAACGCGTTACGATATACGAAACTCGACCTGGCTCGCG
CTGTGCCAAAGTCAGCGTTGTCAAAGTCGCCTCGAGTGTGACCACAGCGTCTTAACCGGC
TGGCAAGCTAAATCGGGAACCGCGTTTAATTTTCATGTGCTGCGCGTGTACGCTGGGTGC
GATGTGCCCGCGCGCGTGAACCGCTGCCTTCTCCCCGCTCCCCCGTGGCTTGCCCGGCCG
CCACCCTGTACCCTGACAACCATCGCCCGCCATGGCGGGTCACCACCGGCAGCGCCGGCC
GCCGCCCCGCCGTCCGCCTCCAGCGCCTCGCCGGCCTCCGTGGGTTCCAACCCTCCTCAG
CCGCTTCACATACCGGCCAAACGATATGAGCCAGAACCGGGTGTCATACGTCACGCGCAA
CAATCTTGGGGTTACCCGCCTGATGCACCAGGTTCCTTCGAGCACCAGTACCCTACGGCG
CCGACTTATTATAATCTCCCGGTGGAGAGGGAACGGAAATCAGCGCTACCGTTCTGGCCG
ACGAGTGGTGGCGAGTACAAGCCGTACGCGGACGGCTGCCATCAAGGTTTCTCGCAGCCC
TGTTGGAACTACCCCTACGGTGCTCCGCGGGGGGACCAGCCTCTGTCGTACGTGGGCGGA
GAGGAGCGCCGGGCAGCTGTCTCCGAGGCGTCGGGCTTCTCTCATGATGCCTATGGTCTC
CGGAACTACGCGCCAGAATCGGTATCTAGCGCCCCTTACCCACCTCCGAGTGCTCTACCC
GGATCCCTGTCGATGTCCGTTGGAGTGGGAGTCGGATGCGGCTCATCAAATCCCTTAGAC
TGGACCGGACAAGTGACTGTGCGCAAAAAACGCAAACCGTACTCCAAGTTCCAGACCCTC
GAACTAGAGAAAGAGTTCCTGTTCAACGCTTACGTATCAAAACAGAAACGATGGGAGCTA
GCGCGGAATCTCAACTTAACAGAACGCCAGGTCAAAATATGGTTCCAGAACAGACGTATG
AAAAACAAGAAGAATTCACAACGGCAGGCGGCGCAGGCGGCTCAAAACAACAACAATAAC
TCGAACGCCAACAACCACAATCACCACGGTCATCACCACGCGCCCCACCACGTGGCGCTG
CACCACGCACCGCCGGCCAAACACCACCAGTGA
Protein sequence:
MSISPPYSSLWEDCSDWRARQHGVLRVRSGCGVPRRPYKQVRRRRYTEHDTKSHVGRAGA
TGAVLVRPPAARWSVFARVCAAPHTALRCHSALDRAADRALLIAAYTRTRYDIRNSTWLA
LCQSQRCQSRLECDHSVLTGWQAKSGTAFNFHVLRVYAGCDVPARVNRCLLPAPPWLARP
PPCTLTTIARHGGSPPAAPAAAPPSASSASPASVGSNPPQPLHIPAKRYEPEPGVIRHAQ
QSWGYPPDAPGSFEHQYPTAPTYYNLPVERERKSALPFWPTSGGEYKPYADGCHQGFSQP
CWNYPYGAPRGDQPLSYVGGEERRAAVSEASGFSHDAYGLRNYAPESVSSAPYPPPSALP
GSLSMSVGVGVGCGSSNPLDWTGQVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWEL
ARNLNLTERQVKIWFQNRRMKNKKNSQRQAAQAAQNNNNNSNANNHNHHGHHHAPHHVAL
HHAPPAKHHQ