New model in OGS2.0 | DPOGS211617  |
---|---|
Genomic Position | scaffold166:+ 25689-31385 |
See gene structure | |
CDS Length | 5697 |
Paired RNAseq reads   | 12820 |
Single RNAseq reads   | 31709 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008238 (0.0) |
Best Drosophila hit   | plexin A, isoform D (0.0) |
Best Human hit | plexin-A4 isoform 1 (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to plexin A CG11081-PA [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to plexin A CG11081-PA [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0017154 semaphorin receptor activity GO:0008046 axon guidance receptor activity GO:0008045 motor axon guidance GO:0007165 signal transduction GO:0016020 membrane GO:0005622 intracellular GO:0007411 axon guidance GO:0016199 axon midline choice point recognition GO:0005515 protein binding |
InterPro families    | IPR013548 Plexin, cytoplasmic RasGAP domain IPR001627 Semaphorin/CD100 antigen IPR002909 Cell surface receptor IPT/TIG IPR002165 Plexin IPR008936 Rho GTPase activation protein IPR014756 Immunoglobulin E-set IPR016201 Plexin-like fold IPR003659 Plexin/semaphorin/integrin IPR015943 WD40/YVTN repeat-like-containing domain IPR013783 Immunoglobulin-like fold |
Orthology group | MCL10098 |
Nucleotide sequence:
ATGTGGCGCGTGCTGCTGGCCCTCGGGGCCGCGTGCGCCGCCGCGCACGCCTCGCAGGAC
GTGGTGCGCAATTTCTCCGACCCTGTATCTGCACCTACATCCCTCTTCAATCACCTCGTC
GTCGACCGCAACACGGGCCGAGTCTACGTCGGGGCAGTCAATTGGATCTATCAACTCTCC
CCTGATCTGGAAGTAGCACAGTCGATTGTCACGGGTCCAGTCAATGACTCTGCGCAATGC
ACTTTCGATTGCCCACCTAACTTCGTGAAGAAACCGACGGACAACGTGAACAAAGCGCTT
GTGATCGATTATGCCACGAGCAGACTTATAACATGCGGTTCGGTTCTCCAAGGGTTGTGT
TCTGTGCGTAACCTTAACAATATTTCTCACGATGTACGTGAAGTCCGGGAACCAGTTGTG
GCGAACAATGCCAGTGCATCCACCGTAGCTTTTATTGCGCCGGGTCCCCCGAACCCTCCG
ATGACCCAAGTGATGTACGTTGGAGTAACGTTTACAGGGAATTCTCCTTACCGTTCCGAG
GTACCTACAGTGAGTAGTCGCTCCTTGGAAGATGACAGGCTCTTTATGATAGCAAGAACA
GCCGTTACTACTGGTACCAGAATGTTTGTCAATTCTCTTTCACGAGAGCGGTATCCAATA
AACTATGTATATGGCTTTAGTTCGGAGGGATTCAGCTACTTTTTGACTACACAATTGCGT
GGAGTAGGGTCGGACACTTACTACAGTAAGTTAGTAAGGGTATGTCATGATGACGAGAAC
TACTATTCATATACTGAAATTCCTATGTCGTGTATGGGTGAGGGGGGCGGAAACTTCGGC
TATAACCTGGTACAAGCAGCATTCGTCGGAAAGGCGGGCTCAGTACTAGCTGGCGAACTA
GGAATAACCGCGCAACATGATGTTCTCTTTGCAGCCTTTAGCCAAAGTGAATTGATAAAT
ACTCATACGCCATCCAATCTATCGGCACTTTGCGTTTATTCTCTGAAAGCCATTCGACGG
AAATTTATGCAAAATATTAAAACGTGCTTCAGTGGCAACGGCTCTCGTGGCTTAGATTTT
ATATCACCGTCACACGCCTGTATTGGAACTAAGCTGCAGTCGATAAGTGAAGATTTTTGT
GGATTGGACGTGAACACTCCCCTGGGAGGAGAGCAACCAGTTGAAGCGGTTCCCGTGGCG
GTATTTAAGAAGAGGCTGACAGCGGTGGCAGCCACAGCTACCGGTGATTACACCGTAGTA
TTCGCTGGTACTGCCGAAGGGCATCTTAAAAAAATCGTCGTTGAGAGCGCTACCTCTGCA
TTCGAATATGGAGACATTGTTGTTGATGAAAACTCACCAGTGAACAAGGATCTGTTCTTT
GACACCCAGCTGATGCATTTATACGTTATGACTGAGCGCAATGTGTACAAAGTAAAAGTT
CAAGAGTGCAGTGTTTACAAATCCTGCCTAACATGTCTCGGAGCCAAAGACCCTTACTGT
GGATGGTGTTCTCTCGAAAACAAGTGCAGTCTCCGATCTGATTGCCAGGAAGCTGCCAAG
GATCCACTGTATTGGATATCTTACCGCAGCGGAAGATGCACAACTATAACCCAAGTGACG
CCGAATCAATTGCAACGAACTACAGCAAGAACTTTAGATTTACTTATTGAGAATTTACCT
ACTCTTAATGGACAATTCTTATGTGCATTTACAGCTTTAGATCGTACTCTCATAACTAAT
GCTACCCGAACGCATAACGGTGTTAATTGTACTACACCGCGTACTGATACTCTGCCATCA
ATTCCAGCCGGTCAGCATCATTTTACCGCTAAACTTTCCGTGCGTACTACTCAGGGACCC
GATTTCGTTGCAACGAATTTTACCTTTTTTGATTGTAATACATATAGTTCGTGTACTCAA
TGTGTTAGTTCGTCTTTTCCATGTGATTGGTGTGTTGATGGTCATCGCTGTACCCATGAT
ACTGCAGAGAATTGTAGGAATGATATTCTCGTTACGGGCGTTAGTAGAATAGGTCCCAGT
TATCGTTCAGGTCCAGGATTTTGTCCCACAATAAACTCTACATCCGACGGTACTAATGAA
ATTCTTGTTCCGTCCGGAGTTAAAAGAGCTATTAAGGTTAAAGTTCATATTATAGGTCAA
TTCATTGTGCAAACAAGATTCGTATGTCAATTCAATATTGAAGGTCGTGTTAATCATGTC
GGAGCTCAACTTCTTGCTGATACTATTTATTGTGAGGCTGTAGAGTTTACTTATACATCA
CGCGCGCCGAACATAACCGCTTCCTTTGCTGTAATATGGGGTGGGTCGAAGCCTTTAGAT
AATCCGGATAACACTCATATACTCATTTATCGTTGTAATGATATGGCAGATAATTGCGGT
ATATGTTTAGCGCTTCCTGAAAAGTTTGGTTGCGGTTGGTGTCAAGGGTCAGACCGTTGT
GAAGTTCAAGAACAATGCGGTGCCCCTAGCGTTTGGTTAAATCGTACCCAGACATGCCCT
AATCCAGAAATTCATTCATTCCGACCTCAATTAGGCCCATGGGACGGTGGAACTAATATT
ACTATTGAAGGCATAAATTTAGGTAGAAATATATCCGATATTTATAATGGTGTTACTATA
GCAGGCATTAAATGTCAGCCTATCATTGAGTTATATGTGAAAACTAGGCGTATTGTATGT
ACCGTAGACGGACCGGGTGAGGAAGTTCCTAGGGACGGGCCGGTCGTCGTTAGAGTCGCA
GATTACCGCGGCGAATCAAAACATCATTATGCATTTGTTAATCCGAAGATTAATTCAATT
CATCCTAAACATGGGCCACAATCTGGCGGAACGAAGTTACGTATAACAGGCGAAAATCTA
AATGCGGGAAGTAATATTCAGGCATTCATAGATGATTTACCATGCGCCATTTTATCGGTA
TCACATGAGGAAGCCGTCTGTAGAACTAGCCATTCCTATCAGCTTAAAATGGGTACGTTA
CGGATGCGTTTCGATAACGGGATGCGTACTTTGGAACGGGAAAAGTTCGAATATGTTGAA
GATCCTGTTGTGATTTCAGTAGAATCTGGTCCACCATTGGCAACACAACGAAAACAACCC
AAAGGCATTCCGTCTGGCGGGATAAACATCAAAGTAATGGGGCGTAATTTTCATTCCATT
CAGTTCCCACAAATATATGTGTATCACGATAATAGACCGTATATAGCCCCTTGTATTATA
GTCGAATATCAAACCCATCTCATATGTGAATCTCCCGGCATCGAAAGCGCTGGCCTGAAT
CTAGACCCCGATAGGCCTTTAGAGTTAGAATACGGTTTTAATATGGATGATGTACAAAGT
GTACAGAATCGAACGACCAAGACGGGTGAAGCTTTCCTTCTTTATCCGGATCCCATTTAT
GATAGGTTTGACGAGGATGTGAAATATTACAAGGGTGAATATTTAACTATTAATGGTCAG
AACTTAGATAGGGCCTGTACAGAAAGCGATGTAGAAGTACATATAGGCGACAGTTTGTGT
AACATTACTTCTCTTGGTAGGCATCAATTAACTTGTAAGCCGCCGTCTCGCGACGAGTTG
CCAGATGGGGTCGAGAGCCCAGAAGTAGTTGTTAAGGTTGGTCGTGCGCTTACTTATAAG
ATTGGTAAATTATCTTATTCTTCGCAGGCTGGCCTGCAGGCTGCTATAGGAAAGCCAGTA
TTATTCGGTGTTATAGCGGGTATAATTATAATTATACTTGTATTTGTCGTGTTTCTAGTT
ATGTATAGGAGAAAATCCACTGAAAATATTAGAGTATTAAAAAATATGCAAGAGCAAATG
GATATTTTAGAGTTAAGGGTAGCAGCGGAATGTAAAGAGGCATTCGCCGAGCTGCAGACT
GAAATGACCGATTTGACGGGTGACGTTACTGGCGGTATACCGTTCCTTGATTATCGTACA
TACGCTATGAAGATATTGTTCCCCAATATTGACGATCACGCCGTACTGCAATGGGAACGT
CCAGAGCTTATTAGGAAAGAAAAAGGTCTCAGATTGTTTGGCCAGCTTATCATGAATAAA
ACATTCCTCCTCTTATTTATTCGTACTTTAGAAAGCAATAGATATTTTTCGATGCGTGAC
CGTGTTAATGTAGCTTCTCTCATAATGGTAACATTGCAAAGTAAAATGGAATATTGTACT
GACGTCTTGAAAACTCTTTTGGCCGAGTTAATCGAAAAGTGCATGGAAAGCCGAAATCAC
CCTAAGCTGTTACTCAGGCGTACTGAAAGCGTCGCCGAGAAAATGCTTAGCGCCTGGTTT
ACGTTCCTCTTATATAAATTTTTACGTGAATGTGCAGGCGAACCGCTGTACCTTTTATTT
AGGTCGATGAAAGGTCAAGTTGACAAAGGGCCAGTGGACGTTATAACCTCGGAAGCGCGA
TACTCTCTCAGCGAAGAGAAACTAATTAGACAGTCCATTGATTTTAAACCGATGACCGTT
AGTGTTTCTATATCCCAACAGACCATCTTCGTTAGCGGTTTAGAGGCTACAACGGAAAAC
GTACAAGTCAAGGTCCTCGACTGTGATACGATTAGCCAAGTCAAGGAAAAATGCTTAGAC
GCTATTTATCGCGCCACACCGTACTCACAAAGACCGAGTCGTGACGAGTTAGATCTGGAA
TGGCGTACGGGCGCTTGCGGTCGTTTGATTCTATACGATGAAGACAGTACCACTAAATGC
GAAAGTGAGTGGCGCAAACTCAATACACTAAATCATTATCGCGTTCCAGACGGAGCTTGT
TTCAGTCTAGTCGCTAAACAAAGCTCGGTTTATAATTTGTCTAATATGGAAAAGAATGAC
AAGTCTCATACATACGAAACTCTTAATAGGGGAAAATATGGTTCCGCTAGTCCACCGGCT
AGCCCGCTTAAGTACGAACACGGAGGCGGTTTTAAATATTGGCACCTCGTTAGGCACCAC
GACGGTGACGCGCACAAAGAGGGAGAGCGTGGAAATAAAATGGTATCCGAGATTTATCTG
ACGCGTCTTCTGGCCACTAAGGGCACTTTGCAAAAGTTTGTCGATGATTTATTCGAGACC
ATCTTCAGCACCGCTCACCGCGGGTCAGCTTTGCCTCTCGCCATTAAATACATGTTCGAC
TTCCTCGATGACCAGGCACTCCAACACGCCATTTCGGATCCCGAAGTGGTCCACACCTGG
AAAAGCAATTCTCTTCCTCTCCGCTTCTGGGTGAACCTAATTAAGAATCCTAATTTCGTT
TTTGATATTTACAAATCGAATACTGTCGATTCATGCTTGTCGGTTATCGCGCAGACCTTC
ATGGACTCCTGCTCGACTTCCGATCAAATTCTTGGCAAAGATTCACCTTCCTCTAAGCTT
CTTTACGCTAAAGATATTCCAGTGTATAAGGAATGGGTAGAACGCTACTATGCGGATATA
AAATTGATGCCGGCAATCTCCGATCAAGATATGAACGCCATGTTAGCAGAAGAATCGCGT
CTTCACACCAAGGAGTTCAATACGAACTGTGCATTGAACGAATTGTATGCGTACGCGGTG
AAGTACAACGAACAGCTTATGGTGACTCTCGAGGAGGACGAGTTCTCGCAGAAGCAGCGG
CTCGCGTACCGCCTCGAGCAAGTCCACGGCCTGATGGCGCACGATTATAACGTTTAA
Protein sequence:
MWRVLLALGAACAAAHASQDVVRNFSDPVSAPTSLFNHLVVDRNTGRVYVGAVNWIYQLS
PDLEVAQSIVTGPVNDSAQCTFDCPPNFVKKPTDNVNKALVIDYATSRLITCGSVLQGLC
SVRNLNNISHDVREVREPVVANNASASTVAFIAPGPPNPPMTQVMYVGVTFTGNSPYRSE
VPTVSSRSLEDDRLFMIARTAVTTGTRMFVNSLSRERYPINYVYGFSSEGFSYFLTTQLR
GVGSDTYYSKLVRVCHDDENYYSYTEIPMSCMGEGGGNFGYNLVQAAFVGKAGSVLAGEL
GITAQHDVLFAAFSQSELINTHTPSNLSALCVYSLKAIRRKFMQNIKTCFSGNGSRGLDF
ISPSHACIGTKLQSISEDFCGLDVNTPLGGEQPVEAVPVAVFKKRLTAVAATATGDYTVV
FAGTAEGHLKKIVVESATSAFEYGDIVVDENSPVNKDLFFDTQLMHLYVMTERNVYKVKV
QECSVYKSCLTCLGAKDPYCGWCSLENKCSLRSDCQEAAKDPLYWISYRSGRCTTITQVT
PNQLQRTTARTLDLLIENLPTLNGQFLCAFTALDRTLITNATRTHNGVNCTTPRTDTLPS
IPAGQHHFTAKLSVRTTQGPDFVATNFTFFDCNTYSSCTQCVSSSFPCDWCVDGHRCTHD
TAENCRNDILVTGVSRIGPSYRSGPGFCPTINSTSDGTNEILVPSGVKRAIKVKVHIIGQ
FIVQTRFVCQFNIEGRVNHVGAQLLADTIYCEAVEFTYTSRAPNITASFAVIWGGSKPLD
NPDNTHILIYRCNDMADNCGICLALPEKFGCGWCQGSDRCEVQEQCGAPSVWLNRTQTCP
NPEIHSFRPQLGPWDGGTNITIEGINLGRNISDIYNGVTIAGIKCQPIIELYVKTRRIVC
TVDGPGEEVPRDGPVVVRVADYRGESKHHYAFVNPKINSIHPKHGPQSGGTKLRITGENL
NAGSNIQAFIDDLPCAILSVSHEEAVCRTSHSYQLKMGTLRMRFDNGMRTLEREKFEYVE
DPVVISVESGPPLATQRKQPKGIPSGGINIKVMGRNFHSIQFPQIYVYHDNRPYIAPCII
VEYQTHLICESPGIESAGLNLDPDRPLELEYGFNMDDVQSVQNRTTKTGEAFLLYPDPIY
DRFDEDVKYYKGEYLTINGQNLDRACTESDVEVHIGDSLCNITSLGRHQLTCKPPSRDEL
PDGVESPEVVVKVGRALTYKIGKLSYSSQAGLQAAIGKPVLFGVIAGIIIIILVFVVFLV
MYRRKSTENIRVLKNMQEQMDILELRVAAECKEAFAELQTEMTDLTGDVTGGIPFLDYRT
YAMKILFPNIDDHAVLQWERPELIRKEKGLRLFGQLIMNKTFLLLFIRTLESNRYFSMRD
RVNVASLIMVTLQSKMEYCTDVLKTLLAELIEKCMESRNHPKLLLRRTESVAEKMLSAWF
TFLLYKFLRECAGEPLYLLFRSMKGQVDKGPVDVITSEARYSLSEEKLIRQSIDFKPMTV
SVSISQQTIFVSGLEATTENVQVKVLDCDTISQVKEKCLDAIYRATPYSQRPSRDELDLE
WRTGACGRLILYDEDSTTKCESEWRKLNTLNHYRVPDGACFSLVAKQSSVYNLSNMEKND
KSHTYETLNRGKYGSASPPASPLKYEHGGGFKYWHLVRHHDGDAHKEGERGNKMVSEIYL
TRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDDQALQHAISDPEVVHTW
KSNSLPLRFWVNLIKNPNFVFDIYKSNTVDSCLSVIAQTFMDSCSTSDQILGKDSPSSKL
LYAKDIPVYKEWVERYYADIKLMPAISDQDMNAMLAEESRLHTKEFNTNCALNELYAYAV
KYNEQLMVTLEEDEFSQKQRLAYRLEQVHGLMAHDYNV