| New model in OGS2.0 | DPOGS200474 |
|---|---|
| Genomic Position | scaffold6765:+ 72-1052 |
| See gene structure | |
| CDS Length | 627 |
| Paired RNAseq reads | 4 |
| Single RNAseq reads | 109 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002895 (4e-12) |
| Best Drosophila hit | CG3225 (9e-15) |
| Best Human hit | probable ATP-dependent RNA helicase DHX35 isoform 2 (2e-16) |
| Best NR hit (blastp) | conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] (4e-21) |
| Best NR hit (blastx) | conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] (1e-16) |
| GeneOntology terms | GO:0004386 helicase activity GO:0005681 spliceosomal complex GO:0000166 nucleotide binding GO:0005524 ATP binding GO:0006397 mRNA processing GO:0003676 nucleic acid binding GO:0008026 ATP-dependent helicase activity GO:0008380 RNA splicing GO:0016787 hydrolase activity |
| InterPro families | IPR001650 Helicase, C-terminal |
| Orthology group | MCL25345 |
Nucleotide sequence:
GAAGAAATCCTATCAGCCTTAGAGAGTTTACAGAGCTACGCGCAGACAAACAACCAGTCT
AACAAGAGTCACTTCCCCAGCGGCATAGCTCGTAGCACGATGACAGTCCTGCCCATGTAC
GGCAGCCTGCCTTACTACAGACAAATAAAGGTCTTCCAAATAGACAGGAACGTCAGGAAA
GTAGTCCTCGCGACCAACATAGCCGAGACTAGCGTCACCATACCCGGGATCGTTTATGTC
AAACCGAACTGTATTCTTGACGGCTCGTCCGTATCTGTTCCAGTGGTGGACAGCGGCTTC
CACAAGCTGCCGCAGTACGACGTCTCGCTCGGCCTGGAGCTGCTGCGCGTGTGTGTCGTG
TCCAGACACAACGCCGTGCAGCGAGCGGGCCGCGCGGGCCGGACTAGTGCCGGCAAGTGC
TACAGCACTTCCGGCACTAGTCCGGCCCGCGCGGCCCGCTCGCTGCACGGCGTTGTGTCT
GGACACGACACACACGCGCAGCAGCTCCAGGCCGAGCGAGACGTCGTACTGCGGCAGCTT
GTGGAAGCCGCTGTCCACCACTGGAACAGATACGGACGAGCCGTCCAGCTACACCGACTC
TACTCGAATACGGTTCGGTTTGACTAA
Protein sequence:
EEILSALESLQSYAQTNNQSNKSHFPSGIARSTMTVLPMYGSLPYYRQIKVFQIDRNVRK
VVLATNIAETSVTIPGIVYVKPNCILDGSSVSVPVVDSGFHKLPQYDVSLGLELLRVCVV
SRHNAVQRAGRAGRTSAGKCYSTSGTSPARAARSLHGVVSGHDTHAQQLQAERDVVLRQL
VEAAVHHWNRYGRAVQLHRLYSNTVRFD