| New model in OGS2.0 | DPOGS216139 |
|---|---|
| Genomic Position | scaffold3644:- 1114-3631 |
| See gene structure | |
| CDS Length | 843 |
| Paired RNAseq reads | 726 |
| Single RNAseq reads | 1963 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007955 (2e-135) |
| Best Drosophila hit | CG6712 (5e-100) |
| Best Human hit | ribosome production factor 1 (7e-64) |
| Best NR hit (blastp) | PREDICTED: similar to CG6712 CG6712-PA [Tribolium castaneum] (4e-107) |
| Best NR hit (blastx) | PREDICTED: similar to CG6712 CG6712-PA [Tribolium castaneum] (2e-104) |
| GeneOntology terms | GO:0005730 nucleolus GO:0003723 RNA binding |
| InterPro families | IPR007109 Brix domain IPR004154 Anticodon-binding |
| Orthology group | MCL14514 |
Nucleotide sequence:
ATGGCTCGCGGAAAGGATAAGAAAAAGCGAAAACTTGAAAAAAAGCAGGAGGGTGACGAT
GTTCCGAAAAAAGTACCACACACCTTGGAATCTCTCAGGGAAAAAGATGAGACTATGCCA
GCAAACGCCGATACTGAGGAGCAAGAAGAGGCACAAAAAGACATGGAACTTGATGAAATG
GCAACATACTTTGAAAACGCATATGAGCCAAAAGTATTGATCACATACTCAGATAACCCG
CACACTAAAACAAGGACATTTGGCCGAGAGCTAATGAAAATTATTCCTAATTCATTATCC
AGATATAGGCAAAGGTCATCAGTTAAGAGAATAGTTCAATCGGCGATAAGAGAGGATATG
ACAGATGTGATAATAGTTAATGAGAATCAGAAGCAGCCCAACGGTTTCCTGCTCATACAT
CTCCCCAGCGGACCGACGGCACATTTTAGACTATCCAGCTGTAAAATAACAAAAGAGATG
AACAAAGACCATAGAGAAATAACAAACCATAGACCCGAGGTTGTGTTAAACAACTTCAGC
ACTCGTCTGGGTCTCACAGTCGGCCGCATGTTGGGGGCGTTGTTTCACTTTGAGCCCCAG
TTTAAAGGTAGACGAGTCGTCACGTTCCACAACCAGAGGGACTACATCTTCTTCAGACAC
CATCGATACGAATTCACGAAAGAAGGAAAACGTGCGAAGCTGTGCGAGCTGGGGCCTCGG
TTCACGCTGAAGCTGATCTCACTACAACAAGGAACCTTCGACTCCAAGCACGGGGACTAC
GAGTGGATCATCGCCGGCCGCAGGCACCAGATGGAGACCTCCAGGAGGAGATTCTTCCTA
TAG
Protein sequence:
MARGKDKKKRKLEKKQEGDDVPKKVPHTLESLREKDETMPANADTEEQEEAQKDMELDEM
ATYFENAYEPKVLITYSDNPHTKTRTFGRELMKIIPNSLSRYRQRSSVKRIVQSAIREDM
TDVIIVNENQKQPNGFLLIHLPSGPTAHFRLSSCKITKEMNKDHREITNHRPEVVLNNFS
TRLGLTVGRMLGALFHFEPQFKGRRVVTFHNQRDYIFFRHHRYEFTKEGKRAKLCELGPR
FTLKLISLQQGTFDSKHGDYEWIIAGRRHQMETSRRRFFL