New model in OGS2.0 | DPOGS211508  |
---|---|
Genomic Position | scaffold7154:+ 576-12684 |
See gene structure | |
CDS Length | 3210 |
Paired RNAseq reads   | 623 |
Single RNAseq reads   | 2449 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008616 (8e-44) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | conserved hypothetical protein [Glyptapanteles indiensis] (0.0) |
Best NR hit (blastx)   | conserved hypothetical protein [Glyptapanteles indiensis] (0.0) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families   | IPR010285 DNA helicase PIF1, ATP-dependent |
Orthology group | ND |
Nucleotide sequence:
ATGTTGCGAAATATCGACCAACCGCGTCTTTGCAACGGCACACGGTTAGCGATAAAAAAA
TTACTAAACAACGTGATAGAAGCAACTATACTGAAAGGACAGTATAAAGGAGAAGATGTG
CTCATACCGCGCATCCCAACGATTCCGACTGATGTGCCATTTGAATTTAAAAGACTACAG
TTTCCAGCGCGGCTTGCTTTTGCTATGACCATAAACAAGTCCCAGGGGCAATCATTAAGT
GTTTGTGGTATTAATCTGGAAAACCCAAGTATCTCCCATGGTCAATTCAAGATTCAGTTA
ACTATAGAATTGGAGGCAAATAATTCTTTAGCTTTCCTTGATATACTTGTCGTTAGGAAT
CCTGACAATACTTTGGGACATACTGTTTATAGGAAACCCACGCATACGGACAGGTACCTC
AATGGTAACTCACACCACCACCCTGGAGCTACCTGTCCCCATACCATCATCGACTGGTTG
ACAGAGAATAACATATGCGGCGGTGATCACAAAATAAAGCTGCTGTACATCATCACCGAC
GGTCTCATCGGTGGCAGAAACGTAGAAATCTGCTTCGAAAAAAACGAGGCCATGCATTAC
GAGGTCGTCGTTTTCCACGCTTTCAATGAACGGCCGCATAATATTGATTTATCTGTGGCT
GCGTCCTTCTTCAAGAGCCGCTGTCTTGTTTACAGTAACTACGATTTACACGACAGCACA
AATATCTCCGAGGAATTCGATTATAGCAGTATCAATATCGATAATTTCGCTGTCCAGAAA
GACCGAATGAAATCTTACATCAAATTGAAGTTCCTCGTCAAAAATAAACGCAACCACCTC
GCTCTGAGCGAAGTCGAAAAACTGAAGAAGCTCCGTGCTCGTCTCTTCAAAGAATTGTCA
TCGACGGAACAAAGTATTGACTTGGAGACTAAGGACAAGGCGGTGTTCCTAAAAACATTC
GTCAAAACCGAATGGTACAGGGATCTGTTTGGTTCGGAACATGACATCAAAGTGGATATT
GATAAATCTATCTCAACTCTTATCAATTACATCACGAGCGATGTCAAAAGCTACTCGTTC
GACGCGCTGAAGTACGACACTAAATTCAGAAAACCCGTCGAAGAAGAGGAAATCATCGAC
GTGGACTTCGCTACTGAACAAGAAATCGTTTTTCCCGATATCATACTCGACGACAATAAA
GGTATCCCTGTAGTGATCCTCACGAAACTGGACTTGCTTGACAAGATTATTTTCCACGGA
AAGAGAAACCAACACGAAATACAGCCAGCCAGCTTCAGCAAGTTCAAATCGGCTATGGAG
TGCCCATTATTTCTGTTAAACGATAATGATATAAGTGATTCTATTGGTTACTTTTATACT
TTGGACGTTTACAAACAGCTGTTGGCGCACGGACAGAGTCATCTAACAGAGCCAAGAACT
AGAAGACCCTTTCACGGCGGATTGGTGCTGACGGAAACGGATGCATTTGACAAATACAAC
GACTACGTGTTGTCCTCGACGTACTTCGATCATAAGAAAGTCGACTTCAATGTGGGATTA
TTCTATTACGTGCTGTGGAAGAATTGCGAAAAGAAAGAATGGATGGATGGAAATGTCGTG
GAACGGTTCAGGGAATATGCAATGAGACGTGTCAGTGGTACCGTCTGCAGAATTGGGCTA
TCATCTCTACCACTTGACCCCCCAGACAAGACGTCTCTACTGACAGCGTTGTGGTACTGC
GTTGAACTGTCTTCGACGTTATTCAAGCACGACCCACAGAATTTCTGTCACGAAAGACTG
AGGATGTTCTACGGAGTGTCCCACGCTATGATCGAAATCTTGAAGTACTTTAATTACGAT
ATGGATTTGAAGGCTATTGAACGACGACGGGAACTGCTCAGTCATGTGATGATATTGAAG
AAAATACCAAAACGCAGAGAGAAAATCCATTATCTGCTGGCGAAGATATTCAGAATCGTG
GACGGGTTTATGGTCAGTGAAATAGTAAAACCTCAGAATCTGTACAAGCTGAATTACCTA
AAACCAAACCACAAGGAAATGCTGAGTGATGATGTGGTGGAAGACACTGTCCATCTAAAC
GATTATGTTCATCTGTTGTTTTACGTCGGCGACCCCGTCACTGAGGAAGATAGCGCAGAC
ACTTTTGATATCTGTCCAAAAACATTTCGTCCTTACTTCGCTATAACCAAAAAGAAGTCT
TTTTATACAGAACTGGTCGATATAACCAGACAAGTCATCATCAAGAACGACCACGACGTA
AATAAAATCCAAATTACCTTCGAGCTGACGGACACTCTTCAATTTGACAGAATCTTATCC
CTATATAAGCTTTACATTAATTGCGTGGAAGACCAAAAGAAGTTCCCGACATACCCCGAG
TATATCGAGTATATTTTGCTGAAGAAAAAATTTGTCGAAGATTTGGTCACTATTTTCCCT
TCCCACGTTATCTCGGGAGCTAAAGACGTTCACTCTCGTTACGAGAAGGTCACAGCTGGA
GTAGATGTTTATAAGTTCATTGAGGTCTGTAAAAAATATGTGACGAGAACAGACAGGGTT
AGGGCAGAAGACAGAGTTCAGTTTGAGAATGAAGAGAGGATCAGAGAGTTCATAACAGAC
GAGGAACAGAAGAAGAAAGAAAAAAAGAAAGAAGTAGAGCGAAGAATCAAAATAAGATGC
AACAAGTACTGGGCACTGAAAGAGGTGTTTAAGAGCAGTCTTCCGGTCTCACTGAAAACG
AAAGCCATGCAGACATGTTTGGTTCCTCTCTCACCTACGCTTGTCAAACATGGCCACTGT
CAGCTAAACAGACTCACAAAGTTAAAGTTTGCCAACATAGCACGGAAAGGATCTTTTAGG
TCTAAAGCTAAGCGACAAAGTGAGAAACCAAGACATCAGAAAGATCACCAATCATCCTCC
GCGGTCACGGACAAACGGCGTGTATGCAAACCCATGAAGCGTCTAATACTATTCCTGTCG
CTTCTGTCCGCGGTGTTCGGACACCACATCCTCTGTATACAGAACGTGCCCTCAAGGAGC
CATCACACCCTCATGATGGGGATCGTGAAGCCGCTGCTGGAAGCTGGTCACCAGGTCACA
ATGATAACGACGTTCCCAGAGGAGAAGCCGGCGAAGAACCTCAGATACATAGACGTCGGC
CACTTGAGGGACCTGGTGCCGAGTAAGTAG
Protein sequence:
MLRNIDQPRLCNGTRLAIKKLLNNVIEATILKGQYKGEDVLIPRIPTIPTDVPFEFKRLQ
FPARLAFAMTINKSQGQSLSVCGINLENPSISHGQFKIQLTIELEANNSLAFLDILVVRN
PDNTLGHTVYRKPTHTDRYLNGNSHHHPGATCPHTIIDWLTENNICGGDHKIKLLYIITD
GLIGGRNVEICFEKNEAMHYEVVVFHAFNERPHNIDLSVAASFFKSRCLVYSNYDLHDST
NISEEFDYSSINIDNFAVQKDRMKSYIKLKFLVKNKRNHLALSEVEKLKKLRARLFKELS
STEQSIDLETKDKAVFLKTFVKTEWYRDLFGSEHDIKVDIDKSISTLINYITSDVKSYSF
DALKYDTKFRKPVEEEEIIDVDFATEQEIVFPDIILDDNKGIPVVILTKLDLLDKIIFHG
KRNQHEIQPASFSKFKSAMECPLFLLNDNDISDSIGYFYTLDVYKQLLAHGQSHLTEPRT
RRPFHGGLVLTETDAFDKYNDYVLSSTYFDHKKVDFNVGLFYYVLWKNCEKKEWMDGNVV
ERFREYAMRRVSGTVCRIGLSSLPLDPPDKTSLLTALWYCVELSSTLFKHDPQNFCHERL
RMFYGVSHAMIEILKYFNYDMDLKAIERRRELLSHVMILKKIPKRREKIHYLLAKIFRIV
DGFMVSEIVKPQNLYKLNYLKPNHKEMLSDDVVEDTVHLNDYVHLLFYVGDPVTEEDSAD
TFDICPKTFRPYFAITKKKSFYTELVDITRQVIIKNDHDVNKIQITFELTDTLQFDRILS
LYKLYINCVEDQKKFPTYPEYIEYILLKKKFVEDLVTIFPSHVISGAKDVHSRYEKVTAG
VDVYKFIEVCKKYVTRTDRVRAEDRVQFENEERIREFITDEEQKKKEKKKEVERRIKIRC
NKYWALKEVFKSSLPVSLKTKAMQTCLVPLSPTLVKHGHCQLNRLTKLKFANIARKGSFR
SKAKRQSEKPRHQKDHQSSSAVTDKRRVCKPMKRLILFLSLLSAVFGHHILCIQNVPSRS
HHTLMMGIVKPLLEAGHQVTMITTFPEEKPAKNLRYIDVGHLRDLVPSK