New model in OGS2.0 | DPOGS200959  |
---|---|
Genomic Position | scaffold9012:- 4922-9520 |
See gene structure | |
CDS Length | 1626 |
Paired RNAseq reads   | 896 |
Single RNAseq reads   | 2346 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010165 (6e-09) |
Best Drosophila hit   | CG2747, isoform A (6e-29) |
Best Human hit | HEAT repeat-containing protein 5A (9e-13) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC004631 [Tribolium castaneum] (4e-62) |
Best NR hit (blastx)   | GG24741 [Drosophila erecta] (2e-33) |
GeneOntology terms   | GO:0005488 binding |
InterPro families   | ND |
Orthology group | ND |
Nucleotide sequence:
ATGGTATGTTTTCACAGAGCGTTGGCCATCGAGGTGTGTCAGATCATCCACCGAGCTGGT
CTAACACAGGAGAGCATCGAGGCGCTGTTGTTGTGTGCTGATGTACTGGAACTAGTGATA
ACAGCCGCCAAGGATCACCTGAGAGCTGCCATCGCTGATAAGACAGCTGAACTAGCCCCG
GATGCAACGCCTGATAGCATGCCAGAATCTGTGTTGGAGGTGGTGCATACGCTGGGGGAG
GGCGGGCCAACGGGGGATCTACCGCCGGGGAAGTCCCTGGTGTTCGCTTGCTTGGAAGTC
TGTTTGTGTCTATTGGTGCGGAGGCTGCCGGCTTTGAGTCCCCTCAAGCAGGAGGGGAGG
GTGGGGGTGATCGGAGTCAGGAAGGGTCTAGGGGTACACGGAGATACACTGCTGATAAAA
AGCCTGGCCTCCATGTCACAACTGACCACACTGACCAGTCCTCAAGAACTAGCCCCGGAT
GCAACGCCAGATAGCATGCCAGAATCTGTGTTGGAGGTGGTGCATACGCTGGGGGAGGGC
GGGCCAACGGGGGATCTACCGCCGGGGAAGTCCCTGGTGTTCGCTTGTTTGGAAGTCTGT
TTGTGTCTATTGGTGCGGAGGCTGCCGGCTTTGAGTCCCCTCAAGCAGGAGGGGAGGGTG
GGGGTGATTGGAGTCAGGAAGGGTCTAGGGGTACACGGAGATACACTGCTGATAAAAAGC
CTGGCCTCCATGTCACAATTGACCACACTGACCAGTCCTCAAGGAGCCTTATCAATTCTG
CCCACCATTTTGTACCTATCCACGGAGGTGATCCGCTCTCTGCAGAGCAGTCCCGCTCTG
TGTGAGGCGGGGGTGCTGCTGCTGCAGCTGGCGGCGGACTGCAGCACGCCCGTGACGTCA
CAGGTGCGGCAACAGCACGCACTGCTGCTGCGAGCCACACTCGCTAATATATTGGAACGT
GTTAAGACAGAGGATCCCGAACAACGTATAGACAGTGTGACGGGGGCTCGGGCGATGGCG
GCGATAGTGGCGAGAGCGGAGCCCGACCCCCCGCTCCATTACCCCTGTATAAACCACTTC
CGGCAGTGTCTCGACACCAAGGACCCAGAGGTGTTCTCGTCCGTGTGTTCCATCCTCCGC
CTTATCTGGTGTCGCTCGTGCCCTCCCCGCTCCGTATCGTGGTGGGCGCGGTCTCTGGCG
GGGAGGGTGGTGGGTTTCGCGGCCGGAGCCCGCCACGCCGCGGACGCGGGCGAAGCGCGG
GCCGCGGTGGCCGCCGTCGGAGCCCTAGACGACCTCGTGGACGCCGCGCCCGACGCTGCC
AGGATCCAAATGTTGTGGATCTTGGTCCCTATAGTGACGTCATACCTCCGTGAACCCCCC
GAGCTCGAGAAGGCGCCTCACTTGAAGATTCTACACGATTTCGCTCTCCAGTGGCTCATG
AGAGTTGGACCGAAACATCCGCAGGAGTTCAAGAGTATGTTGTCTCAGTCACCCGAGCTT
CGGTCCAAGTTGGAAGCCGCCGTGAAAGCCCGCGCTCCGCCGCGTGTCCACACACACACG
AACAGACAACAAACGCCGCATGCACCCACTATACAGCTCAGGACAGATTTTAGTGACTTC
AGATAA
Protein sequence:
MVCFHRALAIEVCQIIHRAGLTQESIEALLLCADVLELVITAAKDHLRAAIADKTAELAP
DATPDSMPESVLEVVHTLGEGGPTGDLPPGKSLVFACLEVCLCLLVRRLPALSPLKQEGR
VGVIGVRKGLGVHGDTLLIKSLASMSQLTTLTSPQELAPDATPDSMPESVLEVVHTLGEG
GPTGDLPPGKSLVFACLEVCLCLLVRRLPALSPLKQEGRVGVIGVRKGLGVHGDTLLIKS
LASMSQLTTLTSPQGALSILPTILYLSTEVIRSLQSSPALCEAGVLLLQLAADCSTPVTS
QVRQQHALLLRATLANILERVKTEDPEQRIDSVTGARAMAAIVARAEPDPPLHYPCINHF
RQCLDTKDPEVFSSVCSILRLIWCRSCPPRSVSWWARSLAGRVVGFAAGARHAADAGEAR
AAVAAVGALDDLVDAAPDAARIQMLWILVPIVTSYLREPPELEKAPHLKILHDFALQWLM
RVGPKHPQEFKSMLSQSPELRSKLEAAVKARAPPRVHTHTNRQQTPHAPTIQLRTDFSDF
R