| New model in OGS2.0 | DPOGS209625 |
|---|---|
| Genomic Position | scaffold305:+ 122581-125171 |
| See gene structure | |
| CDS Length | 969 |
| Paired RNAseq reads | 335 |
| Single RNAseq reads | 885 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006690 (2e-96) |
| Best Drosophila hit | CG14220 (1e-41) |
| Best Human hit | sin3 histone deacetylase corepressor complex component SDS3 (1e-34) |
| Best NR hit (blastp) | PREDICTED: similar to suppressor of defective silencing [Tribolium castaneum] (9e-88) |
| Best NR hit (blastx) | PREDICTED: similar to suppressor of defective silencing [Tribolium castaneum] (2e-57) |
| GeneOntology terms | GO:0016481 negative regulation of transcription GO:0016580 Sin3 complex GO:0042802 identical protein binding GO:0016568 chromatin modification GO:0042826 histone deacetylase binding |
| InterPro families | IPR013907 Sds3-like |
| Orthology group | MCL14182 |
Nucleotide sequence:
ATGTCTTACCAAGGATCACCATATTCGGGGCCAGGGGATGAATACGATTTCGAAGATGAC
GGGTACGATGACTTGTACGAATATAGGGATCCGGAGGACACGCAATCGCAGCATCCAGCG
GATGATAGTGATGAAGACACAGAAGAAGCCAGTGAAACTGACATACCAAATAATGATGAA
CCAGTCGAAATTAAGGAACAGATGTACCAAGATAAGCTCGTGAACCTCAAAAAGCAGCTC
CAACAGCTAGAAGACAACATCCACCCTGAACTCCTGAGGCGGGTGAAACGACTGGAGCAT
CAACTCCACGAACGTCTGAGACTTAACAGAATATACAAAGACCACATGTATGACGTAGTG
GAGAGGGAGTACATAGCAGAGAAAAAGGCAGCAGCAAAAGAGTTTGACGAGAAAAAGATA
GAGTTGAAGGAAAATCTGCTGCATGACTTTGAAGAGAAAAGGAAATTGATAGAAGGAGAA
AGGAACAGCATGGAACTGAACGGAGATTCCATTGAGGTTAAACCTCCGATGAAGCGAATT
CTACGCCGGCGAGCCAACGAGCCGGCCCCAGCGCCCGAAAAGCGTCGCAAGCCCCTAGCT
ACCACGCTGACCTTCCAACTGGACGAGCGGGACATCGACGCGGACCTGAGGGCGATAGCT
CGGACCTCGCCGCCCAGACACACGCAACCTAGAAAACATCTCAACTCGAATAACTGCGAG
TCCCCAGTGCGCGAGGGCGGCGAGTGCGACACGCGTGTAGAGGACGGTAAACTGGTGTAC
GAACGAAGGTGGTACCACCGCGGACAGAGCGTGTACGTCGAGGGCCGGGACATGCCGCGC
TTCCCCGCTTACATACACGCCATCACTGACGACGCGATATGGGTCAAGAAGCCGAATTTA
GAGAGAGTCAGAATATATGTATCACAGCTGGCGCGAGGCAAGGTCACTCTGAAGAGAAGG
GCGTCGTAA
Protein sequence:
MSYQGSPYSGPGDEYDFEDDGYDDLYEYRDPEDTQSQHPADDSDEDTEEASETDIPNNDE
PVEIKEQMYQDKLVNLKKQLQQLEDNIHPELLRRVKRLEHQLHERLRLNRIYKDHMYDVV
EREYIAEKKAAAKEFDEKKIELKENLLHDFEEKRKLIEGERNSMELNGDSIEVKPPMKRI
LRRRANEPAPAPEKRRKPLATTLTFQLDERDIDADLRAIARTSPPRHTQPRKHLNSNNCE
SPVREGGECDTRVEDGKLVYERRWYHRGQSVYVEGRDMPRFPAYIHAITDDAIWVKKPNL
ERVRIYVSQLARGKVTLKRRAS