| New model in OGS2.0 | DPOGS211124 |
|---|---|
| Genomic Position | scaffold196:- 110662-115536 |
| See gene structure | |
| CDS Length | 3216 |
| Paired RNAseq reads | 820 |
| Single RNAseq reads | 1861 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003000 (0.0) |
| Best Drosophila hit | CG8155 (2e-167) |
| Best Human hit | TBC1 domain family member 25 (2e-107) |
| Best NR hit (blastp) | PREDICTED: similar to CG8155 CG8155-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | TBC1 domain family [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0005622 intracellular GO:0005097 Rab GTPase activator activity GO:0032313 regulation of Rab GTPase activity |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL15433 |
Nucleotide sequence:
ATGTTTGGGTATAGTAAAGAAGCTGTTCGTGTAAAAGTCAAGAAATGTGAGGGAAAACTA
CAACCAGAACTTAGAAAATTTTCTGTCGATCCACAAATCACGTCTTTGGAAGTCTTGCAA
AGTATTTTAGTAAAAGCATTTGATATAAAATCAGATTTCACATTATCATACAGGACAGTT
GATGATTATGGACAGGAAATATACCTGCCACTACTCTCAGACTGGGATCTGGACGCAGCT
TTTCTTAAAGCTCATAATATAGCACTAACAATGAGGTTGGAGCCGTGTGTACAGTTAAAG
GTTGATATGAAACCATTTGCTGAAGCTTCCGAGGACTGGGAGCCCCCAACCATCCCAGAA
GCGCCGGTTGGTCAAGTCAGTAAAGATCAACCGGCAGCTCCACAATTAACTCAAGTCGAG
AAACAAGAATCACAGACTGGATTCCAGGGTCTATTTATGAATCAGGTTGAGAAGACGTTT
AACATGGTTTCGAGGGCGCTTAACCTTTATGAGGACCCCAACACCCCTCCACGGCCTCCG
CTGAATGATATCGAGTTCCGAGCATTTCTAGACGCTGTGGGACAAATAACGAATACAATA
AAACTACGAGAGGTTATATACTGCGGAGGAATAGAGCCGAGTCTAAGGAAAGTTGTATGG
AAACACATATTGAACGTTTACCCGGACGGTATGACTGGCAAAGAGAGAATGGACTATATG
AAAAGAAAAGCCAACGAGTATTACACATTACGATCTCAATGGAAAGACTGTATACAGAGA
GGAAAGGTGAATGCTGACTTAGCGTATGTCACAAGCATGGTTCGTAAGGACGTGCTCCGA
ACGGACAGACATCACAACTTCTACGCCGGAAGTGATGACAATCAAAACATCGCATCGTTA
TTTAATATACTGACGACGTACGCATTGTATCACCCTACGGTAAGCTACTGCCAAGGTATG
TCAGATCTGGCTTCACCACTCCTGGTGACTATGGGTGATGAAGCCCATGCGTACATCTGT
CTCTGTGCTCTTATGACTCGGTTGTATCCAAACTTCCTTCTGGACGGAGAGGCAATGACT
CTTAAATTCACACACTTAACGGAGTCTTTGCAAGTCTATGATCCAGATTTCTATAATTAT
CTCAAATCCCAACAGGCCGATGACTTACTTTTCTGCTATAGATGGCTCCTTCTAGAAATG
AAAAGGGAATTTGCTTTCGAAGACGCTCTCAGAATGTTGGAAGTATTGTGGGCGTCTCTA
CCGCAAAAAGCACCCACAGCCGAGTTGCCTTTGAAAGAAAGAGATTTTGATCCAACATTG
GAGGTCATTATAGATCCACCTCCATCGAGTCCCTTAGTAAAGACTCCAAGAGAAAACGCT
TACACGAAAGTATGCGCAATTAGACGTCAAAGCTCAAGTTTTAGTCTGGCTAACATTAAA
GCACCAAAGCTTTCGACTATCCGGCAGTCTAACCACAGCTTGGACGAAAATGCTACTAGA
AAAATTTTAAATAACTCCTCATTAATACACGCGAAGGAATTCCAGAGCTTAGATGATGCT
GCTTTGCAAAAACAGAAAACTATTAAAGATAATGTTGAAAACGAGGAAAAATTGAAAACT
GATAAAGACGGAAAAGATTCTCAAGTTAAAGTTAAGAGGTGTATGAAAAGCGTGCCTGAA
CACGGTAGAGTGGACACTCAGGAACCCAATACGGTTTGGTCGAGTACAGGCAATCTTCCT
AACGGAGTTACGCTAAGTGATACAAAAGACACGCCCCTCGGCAGTCAGATTAGATTACTT
AGAGATAAAATATCAGTACATAATAATAGGTTCTTTTCGTCTCTCGACGCTTTGGAAGGA
CCTAATTCTTCGAACGCAAGTAAACCGACCAAACAAGTGAAAATGATAAAAAATCTCAAT
GAATTTTTAAACTTTGCCACCGGTAATAAAGACGCAGTAAAGCCAGAAAAACTTCAAAGA
ACACATTCCGTTATCGAGAGAAAGCATTCCAAAGAGTGCCCTAAAATTATTTTAACCAAG
ACATCCTACGATGAAAGTGATATTTCTTCGGCCAACCAAAGGAGTAATCGTTTGAGCAAG
CTAACCAAAAGTAGTTTTGATACGAACGACGGCAGTAGTCCTGACGATTCACAAGAGTAT
CATCCGATGACGACTTCCATGACGAGAGAATTAAGACTGGAACTAGAGCACCTGGATCGC
CAGGTTTTTGGTAATTCATATGTTAATCGGTGCAGCATGATTTGTGATTCCCCATCCGAT
TCCACGAGCACCGAGGACAAACCCGCTGAATACGCAGATGCGAAAGGAGACACCGTGGCG
ACTGACGCTGTGGAATTGAGAGCCGAAGTTGTTGACCCGAATGGGACGGTAAAAAAACCG
CTCGACACAATCAAATGTAACGCAAGAAGCGCTGAAGATATATATTTGTGGGAAAATCCA
CTACATCGTAATACTCCAACAACAAGAACTACAGCGAGCTGCCCTCAAACTCCTGACGAG
CAAGCAGAGCTGGATTTCGACGGAGATACGGGCGAGATATTTGAAGAACATTCCGGAAAA
AAATCAATTACACCAATAAGGCTATTGAGAAAAAATCACTCCCTAGAACCACAGGAGCCA
TCGAGGAACAGGAGACATTCCATGACACATTCCAGTGAATCGGATTATTCAGAAAAAGAT
CCAGTGGACTCTACGGAAACCGTTACAGCCAAGAACATTAATCAAGAGCCTCTCCACTTG
AAGTCGCACAAGTTTTTCTCTAACATGTCGCACGAATTAGAAAATGCAAAGAAAAACTGC
GAAAGCCTATTGAGCGTGAAACAGACAAACTTACAAAGCGTTGCTTCGACAATAAATAAC
TTTCAGAAGAAATGCGAGGTTTTCAAGCCGCCGGTACAGAAGAACACGACAGTGTCCACC
ATCAGCGACAATTCGGTTAAGAATAGTATTAGTAGCTTGCCGTCGCCGGCAGTCTTTGGT
GGTGGCAATCCGTTCTTGATGTATTTATGTCTGACAGTATTACTACAGCACAGAGATTAC
ATAATGAGAAACCGGATGGACTACAACGAACTAGCGATGCATTTCGACAAGATGGTGCGT
AAACATAACGTAAACAGGGTATTGAATCAGGCGCGGCAGATGTACGCGATGTATTTGAAA
CAGCAAGCGAACAAGACCGGTGACGTCACCACCTGA
Protein sequence:
MFGYSKEAVRVKVKKCEGKLQPELRKFSVDPQITSLEVLQSILVKAFDIKSDFTLSYRTV
DDYGQEIYLPLLSDWDLDAAFLKAHNIALTMRLEPCVQLKVDMKPFAEASEDWEPPTIPE
APVGQVSKDQPAAPQLTQVEKQESQTGFQGLFMNQVEKTFNMVSRALNLYEDPNTPPRPP
LNDIEFRAFLDAVGQITNTIKLREVIYCGGIEPSLRKVVWKHILNVYPDGMTGKERMDYM
KRKANEYYTLRSQWKDCIQRGKVNADLAYVTSMVRKDVLRTDRHHNFYAGSDDNQNIASL
FNILTTYALYHPTVSYCQGMSDLASPLLVTMGDEAHAYICLCALMTRLYPNFLLDGEAMT
LKFTHLTESLQVYDPDFYNYLKSQQADDLLFCYRWLLLEMKREFAFEDALRMLEVLWASL
PQKAPTAELPLKERDFDPTLEVIIDPPPSSPLVKTPRENAYTKVCAIRRQSSSFSLANIK
APKLSTIRQSNHSLDENATRKILNNSSLIHAKEFQSLDDAALQKQKTIKDNVENEEKLKT
DKDGKDSQVKVKRCMKSVPEHGRVDTQEPNTVWSSTGNLPNGVTLSDTKDTPLGSQIRLL
RDKISVHNNRFFSSLDALEGPNSSNASKPTKQVKMIKNLNEFLNFATGNKDAVKPEKLQR
THSVIERKHSKECPKIILTKTSYDESDISSANQRSNRLSKLTKSSFDTNDGSSPDDSQEY
HPMTTSMTRELRLELEHLDRQVFGNSYVNRCSMICDSPSDSTSTEDKPAEYADAKGDTVA
TDAVELRAEVVDPNGTVKKPLDTIKCNARSAEDIYLWENPLHRNTPTTRTTASCPQTPDE
QAELDFDGDTGEIFEEHSGKKSITPIRLLRKNHSLEPQEPSRNRRHSMTHSSESDYSEKD
PVDSTETVTAKNINQEPLHLKSHKFFSNMSHELENAKKNCESLLSVKQTNLQSVASTINN
FQKKCEVFKPPVQKNTTVSTISDNSVKNSISSLPSPAVFGGGNPFLMYLCLTVLLQHRDY
IMRNRMDYNELAMHFDKMVRKHNVNRVLNQARQMYAMYLKQQANKTGDVTT