| New model in OGS2.0 | DPOGS211127 |
|---|---|
| Genomic Position | scaffold196:- 52902-53753 |
| See gene structure | |
| CDS Length | 852 |
| Paired RNAseq reads | 172 |
| Single RNAseq reads | 473 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003160 (2e-105) |
| Best Drosophila hit | kruppel homolog 1, isoform B (5e-76) |
| Best Human hit | zinc finger protein 45 (5e-34) |
| Best NR hit (blastp) | Kruppel homolog 1 [Bombyx mori] (2e-113) |
| Best NR hit (blastx) | Kruppel homolog 1 [Bombyx mori] (1e-112) |
| GeneOntology terms | GO:0005634 nucleus GO:0045449 regulation of transcription GO:0003700 sequence-specific DNA binding transcription factor activity GO:0007552 metamorphosis GO:0035075 response to ecdysone GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0005622 intracellular |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL16458 |
Nucleotide sequence:
ATGTTCAGCGTGAAAGAGAACCTGCAGGTGCACAGGCGGATACACACCAAGGAGCGGCCC
TACCGCTGCGGAGTCTGCGGGGCCGCCTTCGAGCACTCCGGCAAGCTGCACCGCCACGCC
AGGATCCACACGGGCGAGAGGCCGCACGCCTGCCCCCACTGCCACAAGACCTTCATACAG
TCGGGACAGTTGGTGATCCACCTCCGCACGCACACCGGCGAGAAACCCTACAGGTGTCCG
GCGCCCGGCTGCGGGAAGGGCTTCACGTGCTCCAAACAGCTGAAGGTGCACTCTCGCACG
CACACCGGAGAGAGGCCCTACACCTGTGAAATATGCCTGCGAGATTTCGGCTACAACCAC
GTGTTGAAACTGCATCGCTTCCAGCACTTTGGCGAGAGATGCTACCGCTGCACGGTCTGC
GACGGGACGTTCAACACTAAGAAGCAGATGGAGGCTCACATCTACAAGGAGCACGGGGCC
GAGAGCCCCAAGGCCCCGGCGCCGGCATCGGATTACGCGGTGCCTTTAGTAGTGAATGGC
AACGTCATGTGCGATATCGTGGAAGCCGCCTTACAGCAGCTTCCTCCTACGCCGCCCAGT
TCGCCGCCCTCCCCGCCGTGCTCGCTGCCAGTGCCGGGGTCATTGCAGGCCCCGTGTATA
CCCTCACCCGCCTCGCTCACCCCCTCCCCCTCCCCCACGGAGAGCTCCCCCACGACGGTC
ATGACCCTAGCGCCGTCGTCACTGCCACCCAGAAAACGAAAGCTCGTCCCTCACGTGGAG
CCGGTGCACACGGAGCCGGCGGTCCGCCACACGTCCGTCATACAATTCGCGCCGGCCTCT
AGCGTTTCATAG
Protein sequence:
MFSVKENLQVHRRIHTKERPYRCGVCGAAFEHSGKLHRHARIHTGERPHACPHCHKTFIQ
SGQLVIHLRTHTGEKPYRCPAPGCGKGFTCSKQLKVHSRTHTGERPYTCEICLRDFGYNH
VLKLHRFQHFGERCYRCTVCDGTFNTKKQMEAHIYKEHGAESPKAPAPASDYAVPLVVNG
NVMCDIVEAALQQLPPTPPSSPPSPPCSLPVPGSLQAPCIPSPASLTPSPSPTESSPTTV
MTLAPSSLPPRKRKLVPHVEPVHTEPAVRHTSVIQFAPASSVS